Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1110 ATGCGAACCAATCCATGGCAAGCAAAGATTGAAGCATTTTCATCAAAAGTGAAGATTGAAGTGAAGATGGAACCATTGTCGAAACCCCTCTCTAGTCTCTGCAGCTTGAAAACCCAATCCACTGGCAACTGCGAGGGCGAGATACAGACAACAACAATCTCCATGGCTAGTCCTTCGCTTCTCCAGTCCTCAACGTCGTCGTTCCTGGGTCAATTTCGGGTCTTTCCTGCTCCATTGTCCTCCGGAATCCTCTACAGAAATGGGAATGTATGCGCAGCGGTGCCGGTGAAGGCCACGGTTGGCGATACCGGGATTGTACTGGTGGAGAAGTCTGAGGCAGAGAAGACCTACCGGCTCAAAACAACTTACAATGAGAAAATCGTTCCCTTGCTAATGGAAGAATTCTCCTACGCCAATATACACGAAGTCCCTAAAATTGAGAAGGTTGTGGTTAACTGCGGTATTGGAGATGCCGCTCAAAATGCAAAGGGTTTGGACGCGGCAATGAATGATATGGCACTCATCACAGGGCAGAGGCCTGTTAAGACACGAGCGAGGGCTTCCGTTGCCACCTTCAAGATCAGGGAAGGTCAACCCCTTGGGATTGCTGTGACACTCAGAGGAAAATTGATGTACTCATTCCTTGACCGAGTTATCAACTTGGGGCTTCCTAGGACAAGGGATTTCCAAGGTGTCAACTCCAACAGCTTTGATGGGCACGGAAACTACAGCATTGGCATTAAGGACCAGAGTGTATTCCCAGAAATCAGGTCTGATGTAATGGGAGAGCCTAGAGGAATGGATATATGTATAACTACAACGGCTGGATCTGATCAAGAAGCAAAGAGATTGCTGGCTCTTATGGGCATGCCGTTCAGAGAAGGAGGTGGTCCTGCAACTACAATTCGCAAAAAGAAGCTGAAGTCTCATCATTTTGACTCAAAATCAAAGGGAAAAGGAAGGAAGTAA 969 0.4747 MRTNPWQAKIEAFSSKVKIEVKMEPLSKPLSSLCSLKTQSTGNCEGEIQTTTISMASPSLLQSSTSSFLGQFRVFPAPLSSGILYRNGNVCAAVPVKATVGDTGIVLVEKSEAEKTYRLKTTYNEKIVPLLMEEFSYANIHEVPKIEKVVVNCGIGDAAQNAKGLDAAMNDMALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKLMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIKDQSVFPEIRSDVMGEPRGMDICITTTAGSDQEAKRLLALMGMPFREGGGPATTIRKKKLKSHHFDSKSKGKGRK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1110 322 Gene3D - 110 294 IPR022803 -
Dere11g1110 322 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 120 297 IPR002132 GO:0003735|GO:0005840|GO:0006412
Dere11g1110 322 MobiDBLite consensus disorder prediction 303 322 - -
Dere11g1110 322 ProSitePatterns Ribosomal protein L5 signature. 172 188 IPR020929 GO:0003735|GO:0005840|GO:0006412
Dere11g1110 322 Pfam ribosomal L5P family C-terminus 199 292 IPR031309 -
Dere11g1110 322 MobiDBLite consensus disorder prediction 295 322 - -
Dere11g1110 322 Hamap 50S ribosomal protein L5 [rplE]. 116 294 IPR020930 GO:0003735|GO:0005840|GO:0006412
Dere11g1110 322 FunFam 50S ribosomal protein L5 114 294 - -
Dere11g1110 322 SUPERFAMILY RL5-like 118 293 IPR022803 -
Dere11g1110 322 Pfam Ribosomal protein L5 139 195 IPR031310 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1110 145 250 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.358 9.33e-06 43.9