Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1108 ATGTCAGTCTACGATGCGGCTTTTGTGGACACACAGCTCTCGAAAAAGACCTCAATCTTCGGTCTCCGATTATGGGTTGTGATCGGAATACTCGTCGGCTCTATTATTGTGCTCGCTCTCTTTCTCCTCTCGCTCTGCCTCACCTCTCGCCGCCAAAGACGCCAAAAGAACCCTCAAGGCGACAAAAGCCCTGTCGTTTCGAAGGAAATCCAAGAGATCGTGCACCTGCCCGCACCCAATCAGCACCCAGTCCCAGAGATCCAAGTAGATTTCGGGAAAGCGGAGCACCGGGTCGTGGTGTACTCCGATCGGGTCTCTAGTGGGGAGAGCAAGGGTGGTGCCGCCAGTGCTTGTGAAACGACGTCGTCTTTTGGAAGTGGGAGTATTGGGCCTGAGGTTTCGCATCTTGGGTGGGGCAGATGGTACACCTTAAGAGAACTGGAGGCTGCAACTAATAATCTGTGTGAAGAGAATGTGATTGGAGAAGGTGGGTATGGGATCGTCTACCATGGAGTGCTTCCTGATGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAAAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGGGTGCGTCACAAGAATCTTGTTAGGCTGCTTGGATACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAGTATGTTGATAATGGGAATTTGGAACAGTGGCTTCATGGGGATGTTGGACCTGTGAGCCCTTTGACATGGGATATCCGCATGAACATTATATTGGGAACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGCCAATGGAATGCGAAGGTTTCGGATTTCGGGCTTGCTAAGCTCTTGTGTTCTGAGCGGAGTTATGTCACCACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTCGGAATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTAAATTTAATAGAGTGGTTGAAAGCTATGGTTGGGAGTCGAAAGTCTGAGGAAGTTGTTGATCCTAAGCTACCCGAGATGCCGTCTTCAAAGGCTCTTAAGCGTGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACAAAAAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCGGACGACCAGTTATTCCATGAACGCCGGATCGGGGGAGAATCTTCCCGCCCCCATCGTGATTTGATACGAGAGGATAAAGACTCAAATTCAGATAAAAATGTTGTAGGCAGAGGAAACACTGATCAAAATGAAGATGATTACAGTAGGAATCAACATCAACCCACTAGGTGGAGATAA 1458 0.476 MSVYDAAFVDTQLSKKTSIFGLRLWVVIGILVGSIIVLALFLLSLCLTSRRQRRQKNPQGDKSPVVSKEIQEIVHLPAPNQHPVPEIQVDFGKAEHRVVVYSDRVSSGESKGGAASACETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGEGGYGIVYHGVLPDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKAMVGSRKSEEVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDQLFHERRIGGESSRPHRDLIREDKDSNSDKNVVGRGNTDQNEDDYSRNQHQPTRWR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1108 485 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Dere11g1108 485 Pfam Protein kinase domain 157 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1108 485 SUPERFAMILY Protein kinase-like (PK-like) 132 426 IPR011009 -
Dere11g1108 485 ProSiteProfiles Protein kinase domain profile. 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1108 485 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Dere11g1108 485 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Dere11g1108 485 PANTHER OS01G0323000 PROTEIN 8 443 - -
Dere11g1108 485 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Dere11g1108 485 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1108 485 FunFam Putative receptor-like serine/threonine-protein kinase 230 438 - -
Dere11g1108 485 MobiDBLite consensus disorder prediction 435 485 - -
Dere11g1108 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Dere11g1108 485 CDD STKc_IRAK 160 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1108 Dere-ChrDere11 21700973 21704028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1108 126 426 Receptor kinase-like Gene Family AT4G02010 47.869 3.25e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere11g1108 Pkinase 2.9e-46 CL0016