Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1106 ATGAACGTTTTCCAGTTCAAAAGCCTCCTGCAAAAAAGTTCACAAACCACGCACACACTACAGTCCACACCTACCAATACCAACGCGTCAAATTCTGATCTTTTCTTCTTCTCCCCCACAAATCCTACTCTCTTGTATTCGGACCTCAAAGAGATCGCTTCGCTAGACATGTCTGTGGAGTCAGCCTCTGCTTCAGCTGATCATAACATCAGAAGCGTGCCCACCCATGGTGGACGCTACGTTCAGTACAATGTGTTCGGTAATCTCTTCGAGGTTTCAAGGAAGTATGTCCCTCCGATTCGGCCTGTCGGCAGAGGTGCTTACGGTATTGTTTGTGCTGCTGTGAATGCGGAGACACGGGAGGAAGTTGCCATAAAGAAGGTTGGCAATGCATTCGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGACACATGGATCATGAAAATGTGATGGCCCTCAAAGACATAATTCGACCTCCACAGAAGGAGAACTTCAATGACGTGTACACGGTTTATGAGTTGATGGACACTGATCTGCATCAAATTATACGTTCCAATCAACCATTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTGTTACGGGGTCTCAAATATGTACATTCTGCAAATGTATTGCACCGTGATCTAAAGCCTAGCAATTTGCTTCTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTACGTGGTTACTCGATGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATTATGACCAGAAAACCTCTCTTCCCTGGCAAAGATTATGTTCATCAGCTGAGACTGATCACAGAGCTCATAGGTTCACCTGATGATGCCAGTCTGGGATTTCTACGAAGTGATAATGCCCGTAGATATGTAAGACAGCTTCCACAGTATCCAAAGCAGCCATTTTCCACTAGATTTCCAAACATATCTCCTGGTGCTGTTGATTTGCTAGAGAAGATGCTTGTCTTTGATCCAAACAGGCGCATTACAGTTGATGAGGCTCTATTTCATCCATATTTGGCACCTCTCCACGATATTAACGAGGAACCTGTTTGCCCCAGCCCTTTCAGTTTTGATTTTGAGCAACCAACATTTACTGAAGAAGATATCAAGGAACTTATCTGGAGAGAATCTGTGAAATTTAATCCTGATCCACCAATTCATTGA 1296 0.4298 MNVFQFKSLLQKSSQTTHTLQSTPTNTNASNSDLFFFSPTNPTLLYSDLKEIASLDMSVESASASADHNIRSVPTHGGRYVQYNVFGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVMALKDIIRPPQKENFNDVYTVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRKPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPQYPKQPFSTRFPNISPGAVDLLEKMLVFDPNRRITVDEALFHPYLAPLHDINEEPVCPSPFSFDFEQPTFTEEDIKELIWRESVKFNPDPPIH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1106 431 SMART serkin_6 97 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1106 431 Gene3D Phosphorylase Kinase; domain 1 80 420 - -
Dere11g1106 431 ProSitePatterns Protein kinases ATP-binding region signature. 103 127 IPR017441 GO:0005524
Dere11g1106 431 Pfam Protein kinase domain 101 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1106 431 Gene3D Transferase(Phosphotransferase) domain 1 181 410 - -
Dere11g1106 431 SUPERFAMILY Protein kinase-like (PK-like) 100 390 IPR011009 -
Dere11g1106 431 FunFam Mitogen-activated protein kinase 82 191 - -
Dere11g1106 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Dere11g1106 431 CDD STKc_TEY_MAPK 90 426 - -
Dere11g1106 431 ProSitePatterns MAP kinase signature. 132 235 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere11g1106 431 ProSiteProfiles Protein kinase domain profile. 97 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1106 431 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 95 384 - -
Dere11g1106 431 FunFam Mitogen-activated protein kinase 181 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1106 Dere-ChrDere11 21661872 21670990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1106 57 426 MAP Kinase Gene Family AT4G01370 86.559 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere11g1106 Pkinase 1e-68 CL0016