Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1102 ATGGTTTCTGATGCTTCTTCTGGGCCTCCGCATTTCACAGATGATGAAGCTTACTTTAATGAAGAAAATCGGTGCTTTTACCCTCCAATATCAACAAAAATAGCGAAAGTGGAAAAAACTGGATATTCTGGAAGTGATCTACAAGCGTTGTGTGAAGAAGCAGCAATGATGCCGATTAAAGAGTTGGGTTCTGACATTTTTACTGTTAAGGCAAATCAGAGAATCTCAACTCATGGGCAAACTGTTGCAGTTCCATTTAATCCATCAAATGCTAGAAAAAGTGTGTTGGAAATGAATTGTCAAAGAACAATTACCACAGATAAAAATGTAAGCCTGAAATCTAGTCGAGCATCTGGTGGAGATTATGATGCAAAATTAGTTGAAACAATTAACACTACCATAGTAGATAGAAGCCCTTCTGTTAGATGGGAAGATGTTGCTGGTCTAGAAAAGGCAAAGCAAGCTTTAATGGAAATGGTTATTTTGCCAACTAAGAGAAGAGACCTGTTCACTGGTCTTCGAAGGCCTGCTAAAGGTTTGCTTCTCTTTGGTCCACCTGGTAATGGAAAAACCATGCTTACCAAAGCAATGGCTTCAAAATCAAAAGCAACATTCTTTAACGTATCTACAGCATTGTTGACATCAAAATGGGTTGGTGAAGGTGAAAAGCTTGTCCGGACTCTATTCATGGTAGCTATTTCCAGGCAACCATATGTGATTTTCATTGATGAGGTTGTTAAGGATGCGCTACACGATTTAAGTTTGTCCCCGAAATCAAGAGTTCTTGCACTACACCAGCTGTTCGAAACTATATCAGAGATGTGA 825 0.3915 MVSDASSGPPHFTDDEAYFNEENRCFYPPISTKIAKVEKTGYSGSDLQALCEEAAMMPIKELGSDIFTVKANQRISTHGQTVAVPFNPSNARKSVLEMNCQRTITTDKNVSLKSSRASGGDYDAKLVETINTTIVDRSPSVRWEDVAGLEKAKQALMEMVILPTKRRDLFTGLRRPAKGLLLFGPPGNGKTMLTKAMASKSKATFFNVSTALLTSKWVGEGEKLVRTLFMVAISRQPYVIFIDEVVKDALHDLSLSPKSRVLALHQLFETISEM 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1102 274 Gene3D - 30 84 - -
Dere11g1102 274 Pfam AAA+ lid domain 39 61 IPR041569 -
Dere11g1102 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 251 IPR027417 -
Dere11g1102 274 PANTHER AAA DOMAIN-CONTAINING 39 75 - -
Dere11g1102 274 Pfam ATPase family associated with various cellular activities (AAA) 180 245 IPR003959 GO:0005524|GO:0016887
Dere11g1102 274 Gene3D - 139 245 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere11g1102 Dere-ChrDere11 21605922 21610355 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1102 139 245 Calmodulin-binding Proteins AT3G56690 48.148 1.25e-26 107