Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1090 ATGGCCGATTTCATAACTCCGATCGTGGACATTCTTACTCGCTTCTGGGGTTGCAGCACCAAATGGGTAGTTCCTATACGCAAGCTAGAAGAGAACCTCACCTCTTTGAGGAACGCTTCAGATCAACTCAATAGCGTGTGTCTCGACGTGAAGATGAAGGTAGAAATGGCAGAGGAGGAGCCGCAGCTGAAGCTTTTGAATGAGGTAAATGACTGGTTGGGCAAAGTTGAAGCCCTACAAAACGAAGTCCAGGTTATTCTACATAAGGGTGATCAAGAAATACTGGCCAAGTGTTTTGGAGGTCACTTTTTCAAGAATTGCCGAGCAAGCTACAAGCTCCAGAAAGTGGTGACCCAGAAGTTGGGTGAGGTTCGGGAGCTCATAAGCAAAGGGCATTTTGATGTTGTAGCACAAAATCTTGTCCATGCTCTGTTCGATGAAATGCCTCTGGACAAGACTGTGGGTCTAGAATCAGCATTTGACGAGCTTTATGTGTGTTTTGAGAACGATAAGGTGGGCATCATTGGCTTGTATGGAATGGGCGGCGTGGGAAAAACAACTCTGCTCAAGAAATTCAATAACGAGTTCCTTCCAGCGAGAACACATGATGTAGTCATTTGGGTTGTGGTGTCTAAAGTGGTAGATCTGGGGAAAATTCAAGAAGTCATTAGGAATAAATTACACGTCCAGGATGGTATTTGGGTCAATAAGACGGTGGAAGAGAGAGCTGTTGTGTTGTACAGAATCTTGAAGAAGAAGAAGTTTGTGTTGTTGTTAGATGATGTATGGGGAAGAATTGATCTGCTGAAATTGGGGGTTCCTCCCCCAAATAATTATAAGTCTAAGATAGTTTTCACAACCCGATCTGAAGAGGTTTGCGGCCATATGGAAGCGCAAAGACGCATTAGGGTAGAGTGTCTGGCACCAGAAAAAGCGTTTGAGTTGTTCAAAGAGAAAGTAGGTGGAAGCACTCTTGACTCTCATCCAGATATACCACATCTCGCCAAGATAGTGATTGATGAGTGTAAAGGGCTGCCACTTGCTCTTTGTACGGTTGGACGCTCCATGGCTAATAAGGTCAGTCCCAATGAATGGAAGCGTGCCATAGAAATTTTAAAGAGTTACCCATCAAGATTCTCAGGTATGGTTGATTATGTCTATCACCTGCTTGAATTTAGTTATGATAGATTGTCAAATGCAGCCCACAAGTCTTGTTTTCTGTATTGTTCTCTGTTCCCTGAGGACTATAGTATCAAAAAAGATGAGCTCATCCTACTTTGGATTGGAGAGGGGTTTTTAGCTGAATTTGATGATGATATATATGAAGCACGTAATCAAGGAGAAGATATAATTTTAAGTTTGAAACATGCTTGCTTATTGGAGAATGGGGATGTTGAACAGAGTGTTAAGATGCATGATGTAATAAGAGACATGGCCCTCTGGGTGGCATGTGATCATGGGACAAAAACTAGATTCTTGGTAAAAGATGGTCCGGGGATTTCTGCAGTTGAAGTATATAATCGTGCAAAGTGGAAAGAGGTAGAAAGGCTATCGTTTTGGGGCACTAGCATTCAAAATTTCTCAGGAAAACCTCATTTATCGCATCTCCTTACTATGCTTATTAGAGGAACTTTAGTAGTAAACTTTCCTACTGAGGTATTTCTGCTTACAAATACTATCAGAGTGCTAGATTTGTCAGGTAATAGAAGATTAAAAAATCTACCGTCAGCAATTGGGATCTTTGTAAACTTGGAATACATGAATCTCTCAGATACTGGTATAACAGAATTGCCAGATGAGCTCATGAATTTGAAGTATTTGAGGTGTTTGTTGCTAAATCAAATAAACCGCCTAATATTCCCAAGGCAAGTTATATCAGGTTTACTTTCCCTGCAAACTTTTAGCATGTTACATGGCCATGGTCCAGCCTATGATGAAAATGACTTATTGCATGAGCTAGAAGGCTTGGAACTCCTTCAAGACATAAGCATCGCCCTCTCAAGCCCCTCCTCTGTGCATAAGTTATTGACCTCCCCAAAATTGCAGAGAGGCATTTCTCATCTACGTTTGTATTGTGATATGAATACAAGCTCGCTCCTGATATCTTACTCATCAATGAGAAGAATGGAGCATCTTGAAACACTGAGCATTTCAGGCTGTGACTCTCTGATATTCCCTAAGGAAAAGGAGATACTGCAGGATTCTAAAGCTGAGAATATTCCAAGAAGCTCAAACCAGGTGCATGAATTCACAATCAGCCTTCGTTGCTTATACATTTATCGGTGTGAAAAGTTTGACTTGAATTGGCTTAAACATGCTCCAAGCCTTGAAATCCTCAGCTTATATTCTTGTGCTTCTTTGGAAGAAGTTATAAGTGAAGATTTTGGAGTTGCAGAAACTGAAAGAGTGAAATGGAATCTTTTCTCGAGACTCTCTGTTCTTCATCTTCAATATCTTGCGAAGTTAAGGAGCATCTGTAGAGTAACATTACAGTTCCCTTGCCTGAAGGAGATTGAGGTGATAGGTTGCCCGAATCTGATGAAGCTCCCATTTTATTCTCAGAGCGCAGTGAGAAATCTAAAGCACATTAAAGGAGAGCCAAGCTGGTGGGATCAACTGCAGTGGGAAGATGAAGCTACCAAGGATCTCTTCGTCTCAAAATTTCTGTCCAAATGA 2676 0.4144 MADFITPIVDILTRFWGCSTKWVVPIRKLEENLTSLRNASDQLNSVCLDVKMKVEMAEEEPQLKLLNEVNDWLGKVEALQNEVQVILHKGDQEILAKCFGGHFFKNCRASYKLQKVVTQKLGEVRELISKGHFDVVAQNLVHALFDEMPLDKTVGLESAFDELYVCFENDKVGIIGLYGMGGVGKTTLLKKFNNEFLPARTHDVVIWVVVSKVVDLGKIQEVIRNKLHVQDGIWVNKTVEERAVVLYRILKKKKFVLLLDDVWGRIDLLKLGVPPPNNYKSKIVFTTRSEEVCGHMEAQRRIRVECLAPEKAFELFKEKVGGSTLDSHPDIPHLAKIVIDECKGLPLALCTVGRSMANKVSPNEWKRAIEILKSYPSRFSGMVDYVYHLLEFSYDRLSNAAHKSCFLYCSLFPEDYSIKKDELILLWIGEGFLAEFDDDIYEARNQGEDIILSLKHACLLENGDVEQSVKMHDVIRDMALWVACDHGTKTRFLVKDGPGISAVEVYNRAKWKEVERLSFWGTSIQNFSGKPHLSHLLTMLIRGTLVVNFPTEVFLLTNTIRVLDLSGNRRLKNLPSAIGIFVNLEYMNLSDTGITELPDELMNLKYLRCLLLNQINRLIFPRQVISGLLSLQTFSMLHGHGPAYDENDLLHELEGLELLQDISIALSSPSSVHKLLTSPKLQRGISHLRLYCDMNTSSLLISYSSMRRMEHLETLSISGCDSLIFPKEKEILQDSKAENIPRSSNQVHEFTISLRCLYIYRCEKFDLNWLKHAPSLEILSLYSCASLEEVISEDFGVAETERVKWNLFSRLSVLHLQYLAKLRSICRVTLQFPCLKEIEVIGCPNLMKLPFYSQSAVRNLKHIKGEPSWWDQLQWEDEATKDLFVSKFLSK 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1090 891 FunFam Probable disease resistance protein At1g63360 394 481 - -
Dere11g1090 891 Gene3D Ribonuclease Inhibitor 731 868 IPR032675 -
Dere11g1090 891 SUPERFAMILY L domain-like 465 864 - -
Dere11g1090 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 409 IPR027417 -
Dere11g1090 891 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 850 - -
Dere11g1090 891 FunFam Probable disease resistance protein At1g61300 136 301 - -
Dere11g1090 891 Gene3D Ribonuclease Inhibitor 493 727 IPR032675 -
Dere11g1090 891 PRINTS Disease resistance protein signature 174 189 - -
Dere11g1090 891 PRINTS Disease resistance protein signature 342 356 - -
Dere11g1090 891 PRINTS Disease resistance protein signature 707 723 - -
Dere11g1090 891 PRINTS Disease resistance protein signature 249 263 - -
Dere11g1090 891 Gene3D - 307 393 IPR042197 -
Dere11g1090 891 Gene3D - 394 480 IPR036388 -
Dere11g1090 891 SMART AAA_5 171 314 IPR003593 GO:0016887
Dere11g1090 891 Gene3D - 134 306 IPR027417 -
Dere11g1090 891 FunFam Probable disease resistance protein At5g66910 306 393 - -
Dere11g1090 891 Pfam NB-ARC domain 168 395 IPR002182 GO:0043531
Dere11g1090 891 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1090 Dere-ChrDere11 21412426 21415101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1090 175 723 WRKY Transcription Factor Family AT5G45050 23.676 1.82e-06 50.1