Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1087 ATGGATAAAGAGGAAACCCCACATATTTCCAGAAGAACAACCAGATCTTTAGCTTCAGCATCTACTTCAGATAATGTGGTGACTAAAGTAACTAGCGTTGACCCTCCAACAAAAAATGACCTTATAGTTGAAGGAGATCCTGTCGTGGATAACGAGGAAACCCCACAAATTACCAGAAGAACAACCAGATCTTTAGCTTCAGCATCGACTTCAGTTAACATAGCAACGAAAGTAACTAGCCTTGACCCTCCGACAATAAATGATCTTGTAATTGGAGGAGATCCCCTTAGTCTGGATGATTTGATATCTTCTTTTCCTGGTAGACGTGGCCAGATTCTTGAGCTTGTTCATCTTTTGGGACCAGTGAATTCACCAATGTTTCCTATATTTGTGTATGGAGGTGCTTCTACAGGAAAAACCACTATCATTCTACAATTGTTTAGGCATCTCAACAGGCCTCTTGTTTATTCAAGTTGTAGGACATGCTATAATCAGCGCATCTTGTTTGAATCTATTTTAAACCAATTATTTCTTCATAGAAAAAATGCTGCCAATGGTTATACAAATGTAAAACGCTGTGAAAGACCATCTGACTTTGTCAATTTTCTTCGGGAAGCACTGAACAATGTTATAAACAAATTGAAGGGGAATTCAGAGAATTTGAGATCAAATAAGGTGGCAGAAAGTGGAATTGGAAATATGATTTACTTGGTATTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAAAGTTCTACTATATTACCCTTCCTGTTCAACCTCTATGATCTGCTGAACATGCCAGAGGTGGGCTTGATTTTTATCAGCAATACTTCCCCTGATACCTATTACGCTAATATGGGTTATGTGGAACCTGTCCCAGTCTACTTTCCTGATTATACAGAGGAAGATCATCATCAAATATTCTTGAGAAACCAAGCAAACCAAAAGCTTTATTCCTCATTTCTGGATGTAGTTCTGAGGCCTTTCTGTAGAATTACTAGACAGGTGGATGAATTGTTTACCGCCTTCAAGCCACTATTTGATATATATTGTGAACCTTTAAGTGATCAAGGCGTTGTTCCTAGTGAAGACATGAAGCGAAGGTTATTCAGCCATCTTAAGCCTCATATTGGTTCCTCTTTGAATGAGATATTTAAGGTTTCATCTCTTCCTTCACCTAAAGTTGAGACCCATAAAGAGACAAAACAGAAGGGGAATCCCAAGAAATTGGAGCAATTGGAAGAAATTGAAGAGTTGGAATTTCATATGTCTACTTGTGCTAAATATCTCCTCATTTCAGCATTTCTTGCTTCCAGAAACCCTGCTACCCTTGATGATTCACTTTTTGATTCTACTGGTGGTTCTAATAATCGAAAGCGAAAGAGGAAGCCCTCTACAAAAGTGCTGGAACAGAAGGAAAGTGCAGAAGAGGAACTACTAATGAAAGGACCTGGAACTTTTCCACTAGAGAGGTTGTTAGCCATCTTCCAGTGTATCATATCGGTTGCAGAAGATCCATCTGATGAAGAGAAACAAAGGAATGATGGATTAGGAATCGAAGGTGGCACTGGTGGGCTAATGTCTGACGTTCTTTTGCAGCTATCCAGTCTCTGCAATGCTAATTTTATCATTAAAGGAGGAAGCTGTCCCATAGAAGGCTCGACTCGGTATCGATCTACTATAACTGAAGACCTGGCTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCACTATCAAAGTATTTGTATAGAAGATAG 1758 0.3925 MDKEETPHISRRTTRSLASASTSDNVVTKVTSVDPPTKNDLIVEGDPVVDNEETPQITRRTTRSLASASTSVNIATKVTSLDPPTINDLVIGGDPLSLDDLISSFPGRRGQILELVHLLGPVNSPMFPIFVYGGASTGKTTIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLFLHRKNAANGYTNVKRCERPSDFVNFLREALNNVINKLKGNSENLRSNKVAESGIGNMIYLVFDNFQLVREWDKSSTILPFLFNLYDLLNMPEVGLIFISNTSPDTYYANMGYVEPVPVYFPDYTEEDHHQIFLRNQANQKLYSSFLDVVLRPFCRITRQVDELFTAFKPLFDIYCEPLSDQGVVPSEDMKRRLFSHLKPHIGSSLNEIFKVSSLPSPKVETHKETKQKGNPKKLEQLEEIEELEFHMSTCAKYLLISAFLASRNPATLDDSLFDSTGGSNNRKRKRKPSTKVLEQKESAEEELLMKGPGTFPLERLLAIFQCIISVAEDPSDEEKQRNDGLGIEGGTGGLMSDVLLQLSSLCNANFIIKGGSCPIEGSTRYRSTITEDLALKVARSLKFPLSKYLYRR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1087 585 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 295 582 IPR047088 -
Dere11g1087 585 Coils Coil 583 585 - -
Dere11g1087 585 MobiDBLite consensus disorder prediction 447 472 - -
Dere11g1087 585 Gene3D - 105 284 IPR027417 -
Dere11g1087 585 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 97 584 IPR020796 GO:0000808|GO:0005634|GO:0006260
Dere11g1087 585 Coils Coil 204 224 - -
Dere11g1087 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 368 IPR027417 -
Dere11g1087 585 MobiDBLite consensus disorder prediction 12 35 - -
Dere11g1087 585 Pfam AAA ATPase domain 105 261 IPR041664 -
Dere11g1087 585 FunFam Origin of replication complex subunit 5 105 286 - -
Dere11g1087 585 MobiDBLite consensus disorder prediction 1 40 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1087 52 585 Core DNA Replication Machinery Family AT4G29910 60.748 0.0 668