Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere11g1082 | ATGGGAGAAGTTGTAGAGGAGCCTAATCCAGGTGTGGTTGAAGAGAAAATCTACGTTGCTGTGTCCAAAGAAGTGAAAGAGTGCAAATTAAATCTGATATGGGCGATTCAAAATTCTGGAGGAAAGAAGATTTGCATCCTTCATGTTTATGTGCCTTCAACTATGATCCCCATGTTGGGTACAAAGTTTCCAGCAAGTGCACTGCAAGACCAGGAAGTTGAAGCATACAGAGAAATAGAAAGGCAAAACATGCATAAAAGTCTGAATGAGTATCTTTTAATTTGTCAACGGATGGGGGTGCGAGCAGAGAAACTGTATATTGAAATGGATTGCATTGAGAAAGGAATTGTGGAACTAGTGTCCCAGTATAGCATTCGGAAGCTTGTTATGGGAGCGGCATCTGATAAATCCCATTCTAGGAAAATGATGGACCTCAGATCTAAGAAAGCCATTTATGTACGAGAACATGCTACAGCTTCTTGTCATATACAATTCATCTGCAAAGGGCACCTCATACACACAAGGGGATGCAGTTTGGATAAAGGTAATGTAGAGGCTACATCATCTCCTGTGCCACAGCGAGGGCTATACCCTGACGCTGGACGTTCACTCTACTTGAGATCTCAGTCTGTTGAGCTTGGACATAATCATTGGGTAAGACTCACTAATCCAGCTCAAGATCTAATTCGAAGAGTAAGGTCTGCCAATGCTGAACATCAAGGGAGCATAGCAACTGTTTCTTCTCCAGATGGCACTGAAGGATTGTCAACTCCACGTATCAGGTTGAGTACAGAAGTGAGTTCTGACGAGTCAGAAGGGCTGTCTAGAAGGAGTCTTTCCGTTTTCTCAACATTCTCTGATAGTGGTGCAATTGAAGCACCATCAACCCCAGATTTGATCACTAAGCAGAACGAGATTGTATTGGACTCAAGTGAACTTTCTCTGATTAATGCAGATCTTTGCCATTCATCTCCTCCCAGTGTACTGGATGGGGGAATGGACTATAGTCTTTATGATCAACTTGAGCAGGCCATGGGAGAGGCCGAGAATGCTAGGCAGGATAAATACCAAGAAACTATTAGGCGTGGGAAAGCTGAAAGGGAGGCCATTGATGCTATACGCAGGGCTAAAGCCTCTGAAATCTTATATAGAGAGGAGATGAAACTGAGGATAGAGATAGAGGAAGCACTAGAAAAAGCCAAGGAAGAACTGGGACAGATGAAGAGCCAGAGAGATAAAGTAAATGAAGAACTCCAACTTGCCTTAGATCAGAAGTCATCAATAGAGAGTCAAATTGCATTAACAGAACTTATGAAAAAGGAGTTAGAGCAGAAGATTATATCTGCCGTGGATCTATTACAAAGTTATAAGAAAGAACGTGATGAGCTGCAGATGCAGCGTGATAATGCATTGAGAGAGGCTGAGGAGTTGAAGAAAAAACCAGCAGAGGCTTCAAGCACACATGTGCCTCAATTTTTCTTAGAATTCTCTTTTCCAGAGATTGAAGAAGCAACAAATAACTTTAATCTATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAAGGTATCTTACGTCACACTGAGGTGGCTATCAAAATTTTGCACCCATACAGTTTGCAGGGGCCCTCAGAGTTTCAACAGGAGGTTGATGTATTGAGTAAGTTAAGGCATCCTAATCTTATTACGTTCATTGGAGCCTGTCCAGAATCCTGGACTCTTGTGTATGAGTATTTACCCAATGGAAGTCTTGAAGATCGGCTCAGTTGCAAGGATAATACACCCCCATTGTCATGGCAAACCAGAATTCGCATTGCTGTGGAGCTCTGCTCTGCTCTCATTTTTCTTCATGCCAGTAAATCTCATAGCATAGTGCACGGTGACTTAAAACCCTCCAATATTCTCCTTGATGCTAACCTTGTGAGCAAGCTTAGCGACTTTGGAATCTGTCGGATATTATCTCGTCATGAGAGTTCAAGTAACAATTCTACAGAATTATGGAGAACTGACCCCAAGGGCACTTTTGTCTACATGGATCCTGAATTCCTTGCTTCTGGGGAGCTTACACCAAAGTCAGATATATATTCATTTGGAATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTCGGAATAAGACAGGAAGTAAAGTATGCATTAGATGCTGGAAAGTTGAAATCCCTCTTGGATCCTTTGGCTGGAGACTGGCCATTTGTACAGGCTGAACAGCTGTGTCGCTTGGCATTGAGATGTTGTGAGACAAACCGAAAGAGCCGGCCAGACCTCTATTCAGATGTCTGGAGGATTCTGGAACCGATGAGAGCTTCTTCTGGAGGCACAATTGCCTTCAGACTGGGTTCTGAAGGCCTTTACCAACCCCCTTCATATTTCATTTGTCCAATCTTCCAGGAAGTCATGCAAGATCCGCAAGTTGCTGCTGATGGTTTTACTTACGAAGCTGAGGCTATACGAGGATGGCTGGACGGTGGTCATGAGACTTCACCAATGACAAACGATAAGCTTGCGCATCACAAACTTGTTCCCAACCATGCTCTTCGCTCTGCAATCCAGGACTGGCTTCAGAATAATTGA | 2601 | 0.4306 | MGEVVEEPNPGVVEEKIYVAVSKEVKECKLNLIWAIQNSGGKKICILHVYVPSTMIPMLGTKFPASALQDQEVEAYREIERQNMHKSLNEYLLICQRMGVRAEKLYIEMDCIEKGIVELVSQYSIRKLVMGAASDKSHSRKMMDLRSKKAIYVREHATASCHIQFICKGHLIHTRGCSLDKGNVEATSSPVPQRGLYPDAGRSLYLRSQSVELGHNHWVRLTNPAQDLIRRVRSANAEHQGSIATVSSPDGTEGLSTPRIRLSTEVSSDESEGLSRRSLSVFSTFSDSGAIEAPSTPDLITKQNEIVLDSSELSLINADLCHSSPPSVLDGGMDYSLYDQLEQAMGEAENARQDKYQETIRRGKAEREAIDAIRRAKASEILYREEMKLRIEIEEALEKAKEELGQMKSQRDKVNEELQLALDQKSSIESQIALTELMKKELEQKIISAVDLLQSYKKERDELQMQRDNALREAEELKKKPAEASSTHVPQFFLEFSFPEIEEATNNFNLSLKIGEGGYGSIYKGILRHTEVAIKILHPYSLQGPSEFQQEVDVLSKLRHPNLITFIGACPESWTLVYEYLPNGSLEDRLSCKDNTPPLSWQTRIRIAVELCSALIFLHASKSHSIVHGDLKPSNILLDANLVSKLSDFGICRILSRHESSSNNSTELWRTDPKGTFVYMDPEFLASGELTPKSDIYSFGIILLRLLTGRPAFGIRQEVKYALDAGKLKSLLDPLAGDWPFVQAEQLCRLALRCCETNRKSRPDLYSDVWRILEPMRASSGGTIAFRLGSEGLYQPPSYFICPIFQEVMQDPQVAADGFTYEAEAIRGWLDGGHETSPMTNDKLAHHKLVPNHALRSAIQDWLQNN | 866 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere11g1082 | 866 | SUPERFAMILY | RING/U-box | 791 | 865 | - | - | |
| Dere11g1082 | 866 | ProSiteProfiles | U-box domain profile. | 795 | 866 | IPR003613 | GO:0004842|GO:0016567 | |
| Dere11g1082 | 866 | SMART | serkin_6 | 508 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere11g1082 | 866 | ProSitePatterns | Protein kinases ATP-binding region signature. | 514 | 535 | IPR017441 | GO:0005524 | |
| Dere11g1082 | 866 | Gene3D | Transferase(Phosphotransferase) domain 1 | 581 | 783 | - | - | |
| Dere11g1082 | 866 | Pfam | U-box domain | 797 | 866 | IPR003613 | GO:0004842|GO:0016567 | |
| Dere11g1082 | 866 | SUPERFAMILY | Protein kinase-like (PK-like) | 485 | 765 | IPR011009 | - | |
| Dere11g1082 | 866 | Gene3D | Phosphorylase Kinase; domain 1 | 493 | 580 | - | - | |
| Dere11g1082 | 866 | CDD | RING-Ubox_WDSUB1-like | 797 | 852 | - | - | |
| Dere11g1082 | 866 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 626 | 638 | IPR008271 | GO:0004672|GO:0006468 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Transcription factors information