Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1080 ATGATAATTCTGAGTTTTATGGTTGAAGTTGATCAAAGAGTTGCATCTGATAGTGAATTGAGGAACTTAAGCTGGTCAAGGCATGTGCATGGAAGATGTTTTGATACCTTCTCCTCCAAAGCAAGCTACAACGCAGTGAGCTTCACTCAGCTGGGGAAGGGGAAAAGAGGACAAGGAAGTCAAGAGTATCCAATCATCATGGCAAAAAAGTCACAGAGACGCCCTGTGCGGTATGAGAAAGATCAGTCAGGCTGTATGTGGGGTCTTATCAGTATGTTTGATTTTCGCCATGGTCATGCTTCTCGGAAGTTAATTGCAGATAAAAGACGTGGCAGCAAGCATGCTGTTGGTTCTGTACATTCAAAAAATATGTTTGAGACGTTGAGCAATTTGGACGAAAATTGTCAAGGCAATCTTGATAGCGGAGAGAGTAAAAGACTAACAATGACAACTGAGGCTGGTAAGCCTAGTGTAAAGAAACTCATGGAAGAGGAGATGTTCATTGACGAAGATACCGGCAATGTGGAAGCCAAATCAAAAGAGTCCAGATTAGGGCAGGAAGACACCCTGAAGATAGATTCCAAAAGAAAGAAGAGATCTCACAAGAAAAGCTGTGACTTGGACAACCGTGACTTTAATCCAGATACAACCTTAAAAACAGATCTATCACATAGTCGGCATTCAAGGCAACAATCTAAAAATGATATTGATTTGGACAAGGTATTGGAGGATTTTTGTCATATGAAAAGTGCTTTTTCTGTGATGCATGACCATGGTGGTGAAGTTGATGAACAATCAAACCAGAAGTGTGTTATTGCTGAAAATAATGCAAGAGATGCAATCCTTGAATTTGTAAATCAGATGACATTTGATGGGAAAGATCTGACAGAAGCTAAAAAATTCCTTTGCTCCCATGAATTCTTGGATGCACTTCAAATTTTAAGTTCAGATAAGGAAATGTTTCTGAGTCTTTCACAAGACCCAAATTCACTGTTGTTAAAATATATTCAAGAGTTGATCAATACTCGTGTATCAGATGATAAAGAACACAGGTCAGTTACTGGCTCCAACTTGTCTGAATATGAGCCTGATAGTTTGAAACAGACTAGACAGATTGTCAACCACAAGCAGCATAACTTTTTCAGGAAAATGGTGAAGTCTCGAGCAAAAGATCAAACAAGTGGAAAAGAGAATACTGAATCTTCAAATAGGATTGTTATTCTGAAACCTGGGCCAATGGGCTTTCAATATTCTGAAGCTGAAAACAATCTTTCTCCATCCCTAGATTCTTATGAGGGTTCTTCTGTGAGAGCTGGATTACATTTTTCTCTTACAGAGATAAAAAAGAAATTAAAACATGTCATGGGAAAGGAGAGGAATGGAAACCCTCAGAGGGTCTCAAAAAAAATTCCTGCTGAATGTCAGAATAAGGGGAAAGGCAGCAAAGTCATTGGCAAAGACAGTACTGGAATGAAATCTCCTAATAAAGACCACTTTTTCCTTGAAAAAATTGCAAAACCAATTGAGAAGAAAGGAGATAAGAATGGTGCATTGAATGACTCTGAAGTGATAGTGGAACATGAAAATGGTAGTTATCCCAAACAAAGGGTTTCTAGCATATATATTGAGGCCAAGAAACATCTGTGTGAGATGCTAGGCAATGAAGATGAGAAAATGGACTTTTCAGGTAGAAAGGTTTCCAAAACCCTTGGGAGAATTCTATCTCTTCCTGAGTACAACTTGTCTCCCCTTGGTAGTCCTGGACGGGACTGGGAGCATCAATTTGTGACTGCACGGACAAGATTGTTGTCTCCCAAACAAGCTACCATTATGGGTCAGCTGGAGCAGGAAACAAGCAGTCCAGAAAAGCAGCCAAATATTTGCGATGATTGCTCTGATAATAAAGTACAAGAAATTAAATCAGAGCTGAATGTTGCAGAGGACCTTGTTCATAATGCGAAAGCAGATGCAACCAGTCATCCTGTTAGAGATGAGATAGTTCCTGAAGGTAAAGTAGAAACTCCTAAAGCTAAAAATGTTTTGGATTCTTCCTCTGAACCAGTAGATTTGATCGTAGAAAACAACCAAATGTGTGACATCTCTGAACTTTCTGATGGTGTGAGACATTCTCAATGTTTGAATCAGGATGTATCAGAAGATAACCAACCACCATCTTCTCCACTGTCATCTCCTTCTCACTATTCCGTCACTAAGAAAATTGAAGAGCTAGAAAGTGGTGTAGAAGTGGCTGGGCGGCCCAGTCCTGTATCTGTTCTTGATACACCATTCCTTGAGGATGACACCAGCCCTGGAAACAACAGAATCCAACTTGTTAAAAACCAAGTACAACCACTACAAATTCAATTTGAAGAACATGACTCCTTATCCATGGATCAAATTGATAAAGGAAAACAGTGTGTTGAAGAAAACAAGTTGATATTTGACTACATTAAAGCAGTCTTGCAAGCCTCTGGCTTCAGTAGTGATCAATTGTGGATGAGGTGTGTTTCCTCGGACCAGATACTTGACCCATCATTGTCTGATCAGGTAGAGTTCTTCTCAAACCAGCTATGCCATGATCAGAAGCTCCTATTCGACTGCATCAACGAAGTACTTATGGAGGTTTGCTGGTATTACTTTGGCGTCTCACCTTGTGTATCATTTGTAAAACCTAACAACATAAGACCAACCCCAAATATGAAAACAGTTATCCTTAAAGTCTGGGAAGGAGTGTGCTGGCATTTACTTCCTTTATGCCCACCACATACTTTGGACCAAATTGTTAGGAAAGACATGGCAAGAAGTGGAGGATGGATGGACCTTCGATTTGATGCCGAACAAGTTGGTGTTGAAATGGGTGAAGCCATTCTTGCAGAACTGATGGAAGATACAATACTGAGCTGTGCAAGTGAAAGCATAGAAAGTAAATGTTTTGAGATTCAATGTGAATCGAAGGACATGGACAGCAGCACCAACATGTAG 2982 0.3994 MIILSFMVEVDQRVASDSELRNLSWSRHVHGRCFDTFSSKASYNAVSFTQLGKGKRGQGSQEYPIIMAKKSQRRPVRYEKDQSGCMWGLISMFDFRHGHASRKLIADKRRGSKHAVGSVHSKNMFETLSNLDENCQGNLDSGESKRLTMTTEAGKPSVKKLMEEEMFIDEDTGNVEAKSKESRLGQEDTLKIDSKRKKRSHKKSCDLDNRDFNPDTTLKTDLSHSRHSRQQSKNDIDLDKVLEDFCHMKSAFSVMHDHGGEVDEQSNQKCVIAENNARDAILEFVNQMTFDGKDLTEAKKFLCSHEFLDALQILSSDKEMFLSLSQDPNSLLLKYIQELINTRVSDDKEHRSVTGSNLSEYEPDSLKQTRQIVNHKQHNFFRKMVKSRAKDQTSGKENTESSNRIVILKPGPMGFQYSEAENNLSPSLDSYEGSSVRAGLHFSLTEIKKKLKHVMGKERNGNPQRVSKKIPAECQNKGKGSKVIGKDSTGMKSPNKDHFFLEKIAKPIEKKGDKNGALNDSEVIVEHENGSYPKQRVSSIYIEAKKHLCEMLGNEDEKMDFSGRKVSKTLGRILSLPEYNLSPLGSPGRDWEHQFVTARTRLLSPKQATIMGQLEQETSSPEKQPNICDDCSDNKVQEIKSELNVAEDLVHNAKADATSHPVRDEIVPEGKVETPKAKNVLDSSSEPVDLIVENNQMCDISELSDGVRHSQCLNQDVSEDNQPPSSPLSSPSHYSVTKKIEELESGVEVAGRPSPVSVLDTPFLEDDTSPGNNRIQLVKNQVQPLQIQFEEHDSLSMDQIDKGKQCVEENKLIFDYIKAVLQASGFSSDQLWMRCVSSDQILDPSLSDQVEFFSNQLCHDQKLLFDCINEVLMEVCWYYFGVSPCVSFVKPNNIRPTPNMKTVILKVWEGVCWHLLPLCPPHTLDQIVRKDMARSGGWMDLRFDAEQVGVEMGEAILAELMEDTILSCASESIESKCFEIQCESKDMDSSTNM 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1080 993 Coils Coil 636 656 - -
Dere11g1080 993 MobiDBLite consensus disorder prediction 715 735 - -
Dere11g1080 993 MobiDBLite consensus disorder prediction 347 366 - -
Dere11g1080 993 Pfam Domain of unknown function (DUF4378) 814 963 IPR025486 -
Dere11g1080 993 Pfam Protein of unknown function (DUF3741) 286 330 IPR022212 -
Dere11g1080 993 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 67 968 - -
Dere11g1080 993 MobiDBLite consensus disorder prediction 170 194 - -
Dere11g1080 993 MobiDBLite consensus disorder prediction 170 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1080 Dere-ChrDere11 21280177 21285305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1080 67 951 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.368 1.87e-109 357