Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1066 ATGGCAACTGATATGCAGAAGCTAATTGGAACAAGTGAAGAAGATGAGGAAGACATGGAAATGGATGTGAAAGAAGAGGATGATGATGATGAAGAGAATGGTGGTATTCATGGGGCTGCTCCAGTGATGGTAGAGATTGATGGTGGGGTAGTAACTTCTAGCGGTAACAACAGGTTTCAGCAGCACCAGCAATTCCAAGAACAAGTCAGCACCCCAGGTGGTAGTACTCGGCGGTGTAGGCCACTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGCGGCATCGTAGGGCTATTACTGCTAGAATCTTGGCAGGGCTTCGGAGGCATGGCAACTACAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCTTCAAGATCTCAGGGTCAGAGACCAGCTGGTGGTAGTTCTACAGTGGCTACTACATCGGTTTCCCATATGGCTTCACAACAGACTACACCTGCTTCCCTCAAGGGAGCCACTTCAGGATATAGAAGCGCATCAGAGTATAACACAAGCCGAATGAAAGGTGTTTTTATGCCATCTCCATTGCCTTATGATCTAGCCTCGGGTTCCCAGTCTCAAACTTCATCCATGGTGGGAAGTGGAGAAGAACAGAGAGACAACCATCCTCTCATTGGCAGTTCAATAAATAGCCTTGATGAAAAGCAGATTGTTGACATGCCCCACAGGTTATCAGAGCGTGATTTTGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATCAATATGAAGTGTGAACTTGTCGATTCGGATGGTCTACTAAAGCAGCTGAGGGTTTTGAAATCAATACATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGGATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAACGGTTACAAAAAACTCTTTCAGATGGTGCGTGAACTTAAGCTTAAGTTGCAGGTTGTGATGTCTTTCCATGAATGTGGAGGCAATTTTGGTGACGATGTTTGTATTCCAATACCCCACTGGGTTGCTGAAATTGGTCGGAGCAATCCTGACATATTTTTCACTGACAGAGAAGGAAGGCACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGGTTTTAAGAGGTCGGACTGCTGTTGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTGGAGTTTGATGAGTATTTTGAAGATGGTATAATCTCCATGATTGAAGTTGGACTGGGTCCATGTGGGGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAATATTTGCTAAAAAGTCTTAGGAAGGCAGCAGAAGCAAGGTGTCACCCTGCATGGGCTAGGGGACCAGATAATGCTGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGTGATGGAGGTGATTATGATGGTTACTATGGCAGGTTCTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAATTGGGTGCTTTCTCTGGCAAAATTAGCATTTGAGGGAACCTGCATTGCTGCAAAGCTGTCAGGTATTCACTGGTGGTACAAGACAGCAAGTCATGCTTCTGAATTAACTGCTGGGTTTTATAACCCATGCAATCGTGATGGTTATGCAGCAATAATGGCAATGCTAAAGAAGAATGGAGCAAGCTTAAACTTTGCGTGTGCTGATTTGCACACGTTGAACCAGCATGAAGACTTTGCAGGGGCATTTTCAGATCCTGAGGGATTAGTCTGGCAGGTGATGAATGCTGCTCGGGATGCTTGCCTACCAGTTTCTAGTGAGAATGCGCTTCCTTGCCTAAATAGAGTTAGCTATAATAAGATTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAATCATTTTACATCTTTTACTTACCTGAGACTTAGTCCACTTCTTATGGAAAGGCACAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGTGAAGCTGTACTTGATCTCCAGGTATAG 2100 0.4433 MATDMQKLIGTSEEDEEDMEMDVKEEDDDDEENGGIHGAAPVMVEIDGGVVTSSGNNRFQQHQQFQEQVSTPGGSTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQRPAGGSSTVATTSVSHMASQQTTPASLKGATSGYRSASEYNTSRMKGVFMPSPLPYDLASGSQSQTSSMVGSGEEQRDNHPLIGSSINSLDEKQIVDMPHRLSERDFAGTPYVPVYVMLPLGVINMKCELVDSDGLLKQLRVLKSIHVDGVMVDCWWGIVEAHAPQEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGIISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLRKAAEARCHPAWARGPDNAGTYNSQPHETGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNWVLSLAKLAFEGTCIAAKLSGIHWWYKTASHASELTAGFYNPCNRDGYAAIMAMLKKNGASLNFACADLHTLNQHEDFAGAFSDPEGLVWQVMNAARDACLPVSSENALPCLNRVSYNKILDNAKPMNDPDGNHFTSFTYLRLSPLLMERHNFIEFERFVKRMHGEAVLDLQV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1066 699 MobiDBLite consensus disorder prediction 1 37 - -
Dere11g1066 699 SUPERFAMILY (Trans)glycosidases 256 695 IPR017853 -
Dere11g1066 699 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 210 692 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 Gene3D Glycosidases 253 698 - -
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 317 335 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 539 555 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 296 310 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 556 567 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 614 636 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 339 360 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 505 524 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 574 597 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 432 454 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 MobiDBLite consensus disorder prediction 208 228 - -
Dere11g1066 699 Pfam Glycosyl hydrolase family 14 265 683 IPR001554 GO:0000272|GO:0016161
Dere11g1066 699 MobiDBLite consensus disorder prediction 11 33 - -
Dere11g1066 699 Pfam BES1/BZR1 plant transcription factor, N-terminal 76 212 IPR008540 -
Dere11g1066 699 PRINTS Plant beta-amylase signature 422 431 IPR001371 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Plant beta-amylase signature 680 694 IPR001371 GO:0000272|GO:0016161
Dere11g1066 699 PRINTS Plant beta-amylase signature 665 679 IPR001371 GO:0000272|GO:0016161
Dere11g1066 699 FunFam Beta-amylase 253 699 - -
Dere11g1066 699 MobiDBLite consensus disorder prediction 142 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1066 Dere-ChrDere11 20423104 20429470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1066 1 696 Glycoside Hydrolase AT2G45880 67.668 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Dere11g1066 Glyco_hydro_14 8.4e-107 CL0058