Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1061 ATGGGAATCCAGTGCTCCTCACTCATTCCATGTTGTGTGAATTCACAAGTTAAGGCATCTGCTCTTGAAGCTCCTGATGCCGTTAATGAGGATACAAGTGAGGCCAATAACTGGCCTGCATTCCGTGAATTTACATTTGAGCAACTTAAGAATGCAACATCTGGTTTTGCTGTGGAAAATATTGTATCTGAACATGGGGAGAAAGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCTGTAAAGCGGTTTAATAGAAATGCTTGGCCTGATGCTCGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTCCGTAACCAAAGATTGGCGAATTTGCTTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCTGAATTTATGCCAAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAACACAACCCATGAAATGGGCAATGCGACTGAGAGTTGTTCTATATATTGCACAAGCTCTAGAATACTGTACAAGCAAAGGGCGTGCTCTCTATCATGACCTTAATGCATATAGGGTTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCCAGTTTTGGCCTTATGAAGAATAGTAGAGATGGGAAAAGTTATAGCACAAATTTGGCCTTTACTCCTCCAGAGTATCTGAGAACTGGGAGAGTAACACCAGAGAGTGTAATTTATAGCTTTGGCACTCTTTTGCTTGATCTTCTCAGCGGGAAGCATATCCCTCCAAGCCATGCCCTTGATTTGATTCGGGACAGAAATCTTCAGATGCTGACAGACTCTTGTTTGGAAGGACAGTTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGGTGTCTACAGTATGAACCTAGAGAACGGCCAAATCCAAAGTCATTGGTGGCTGCGTTAGCTCCTCTTCAAAAAGAAACAGAGGTTCCTTCCCATGTCTTGATGGGAGTCCCACACAGTGCTACTTTTGCTTCATTGTCCCCACTTGGTGAAGCATGCTCAAGAAAAGACTTGACTGCTATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGACAAATGAGTTATCATTCCAGATGTGGACAGATCAAATGCAGGACACACTAAATTGTAAGAAAAAGGGGGATGTTGCTTTTCGGCAAAAAGATTTTCGACTTGCAATTGAGTGCTATACACAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCACGGCGCAGTTTGTGTTATCTCATTAGTGACATGCCTCAAGAAGCACTGAATGATGCAATGCAAGCACAAGTTATTTCGCCCATATGGCACATTGCATCTTATCTTCAATCGGTGGCCCTTGCAATGATCGGGATGGGGAATGAAGCCCAAATAGCACTTAAAGAGGGCACAACACTTGAAGCCAAGCGAAATGCAGCTTCTGGACAAAAAAGTAAGTGA 1482 0.4278 MGIQCSSLIPCCVNSQVKASALEAPDAVNEDTSEANNWPAFREFTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVLYIAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGVPHSATFASLSPLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFQMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYTQFIDAGTMVSPTVYARRSLCYLISDMPQEALNDAMQAQVISPIWHIASYLQSVALAMIGMGNEAQIALKEGTTLEAKRNAASGQKSK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1061 493 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Dere11g1061 493 SUPERFAMILY TPR-like 381 481 IPR011990 GO:0005515
Dere11g1061 493 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1061 493 SUPERFAMILY Protein kinase-like (PK-like) 36 319 IPR011009 -
Dere11g1061 493 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Dere11g1061 493 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Dere11g1061 493 FunFam probable serine/threonine-protein kinase At4g35230 380 489 - -
Dere11g1061 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 485 IPR045845 GO:0004672|GO:0009742
Dere11g1061 493 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Dere11g1061 493 Gene3D Tetratricopeptide repeat domain 380 492 IPR011990 GO:0005515
Dere11g1061 493 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1061 Dere-ChrDere11 20370170 20375276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1061 10 313 Glycoside Hydrolase AT3G07070 33.434 1.32e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dere11g1061 PK_Tyr_Ser-Thr 6.9e-28 CL0016