Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere11g1039 | ATGTCGTTCACTGGAACTTTGGATAAATGCAAGGCTTGTGATAAGACTGTTCATGTGGTGGACATGATGACTCTTGAAGGTACTCCTTACCATAAATCCTGCTTCAAGTGCAGCCACTGCAAGGGATTTCTTTCGATGAGCAGCTACTCTTGGATGGATGGTGTCCTCTACTGCAAACCACATTTTGAGCAGCTTTTCAAGGAATCTGGCAATTTCAGCAAGAACTTTCAGACAGGAAAGTCTTCTGAGAAGAATGATCTGTCCAGGACTTCAAGCAAGCTCTCTTCCATGTTCAGTGGAACCCAAGACAAGTGCTCTGTTTGTGGAAAAACAGTCTATCCTCTGGAAAAGATGACACTGGAAGGTGAGTGCTTCCACAAGTCATGCTTCAGGTGTGCTCATGCAGGGTGCCCACTGACCCACTCCTCCTATGCTGCCCTTGATGGAGTCCTCTACTGCAGGCACCACTTTGCCCAGCTCTTCATGGAGAAGGGCAATTACAACCATGTCCTCCAGGCAGCTGCTCACAAGAGGAGTGCCAGCGCTGGCACTCCTCCGCCTGAGCCGGCCACCGAAGAGGATGAGGAGAAGCCTGAGGACTCGCCTAAGGTGGTGCAGGACGATGAGGAGGAGGACAAGAAGCCCAAAGATGATGATGATGCAGAGCAATCTTAG | 675 | 0.4993 | MSFTGTLDKCKACDKTVHVVDMMTLEGTPYHKSCFKCSHCKGFLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQTGKSSEKNDLSRTSSKLSSMFSGTQDKCSVCGKTVYPLEKMTLEGECFHKSCFRCAHAGCPLTHSSYAALDGVLYCRHHFAQLFMEKGNYNHVLQAAAHKRSASAGTPPPEPATEEDEEKPEDSPKVVQDDEEEDKKPKDDDDAEQS | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere11g1039 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 36 | 76 | - | - | |
Dere11g1039 | 224 | PANTHER | OS06G0237300 PROTEIN | 6 | 81 | - | - | |
Dere11g1039 | 224 | ProSiteProfiles | LIM domain profile. | 103 | 163 | IPR001781 | - | |
Dere11g1039 | 224 | FunFam | LIM domain and actin-binding 1 | 99 | 169 | - | - | |
Dere11g1039 | 224 | MobiDBLite | consensus disorder prediction | 196 | 224 | - | - | |
Dere11g1039 | 224 | ProSiteProfiles | LIM domain profile. | 8 | 68 | IPR001781 | - | |
Dere11g1039 | 224 | Pfam | LIM domain | 10 | 65 | IPR001781 | - | |
Dere11g1039 | 224 | Pfam | LIM domain | 105 | 160 | IPR001781 | - | |
Dere11g1039 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 131 | 170 | - | - | |
Dere11g1039 | 224 | FunFam | LIM domain and actin-binding 1 | 4 | 74 | - | - | |
Dere11g1039 | 224 | MobiDBLite | consensus disorder prediction | 176 | 224 | - | - | |
Dere11g1039 | 224 | CDD | LIM1_SF3 | 6 | 68 | - | - | |
Dere11g1039 | 224 | SMART | lim_4 | 9 | 61 | IPR001781 | - | |
Dere11g1039 | 224 | SMART | lim_4 | 104 | 156 | IPR001781 | - | |
Dere11g1039 | 224 | ProSitePatterns | LIM zinc-binding domain signature. | 10 | 44 | IPR001781 | - | |
Dere11g1039 | 224 | MobiDBLite | consensus disorder prediction | 76 | 102 | - | - | |
Dere11g1039 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 3 | 35 | - | - | |
Dere11g1039 | 224 | Gene3D | Cysteine Rich Protein | 6 | 74 | - | - | |
Dere11g1039 | 224 | Gene3D | Cysteine Rich Protein | 99 | 169 | - | - | |
Dere11g1039 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 97 | 130 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere11g1039 | Dere-ChrDere11 | 20052646 | 20055227 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LIM | Dere11g1039 | LIM | 1.7e-10 | CL0167 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere11g1039 | 11 | 20052646 | 20055227 | Dere11g1039 | 11 | 20052646 | 20055227 | ECH |