Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1011 ATGGACCTGGTAGCAACAATCTGGGATGCAACAAAGTGCTTGTGTGATTGCACAGCCAAACATGCCGCTTTCATTTCCCATTTGGAGGAAAACCTACAATCTTTAGCAGAACAATGGACTGAGCTACAAAACCTAACCCAAGATGTGAATGTAAGGGTCCAACGAGCCGAAACCAACCCACATATGCGAAGGACCAAAGAAGTAGATGGTTGGCTCCAATCTGTAAACTACATGGAACAGACCATAGAAGATATTAAGAAACGGGGAGATAAAGTTGCTCGAGATAAGTGTTTGGGAAAGTTTTGTCACAAGAATTGTCTGTCAAGCTACAATTTGGGAGCAGAGATTGTCAAGGCACAAGGTCGGTTAAAAGACTTGATGGACAAAGGACAAAAGTTTCATAGCGAAGCTAATATTGCTTATGAGCTGCCACGTGAGCCTGTGGATGAGATGCCAGTACCTAACACCGTGGGCATGGATTTGATTCTAGAGAAGGTATGGGATAGCATTGAAGATAGAAATGTGGGCATAATTGGTTTGTATGGCATGGGTGGGGCAGGGAAAACAACACTCATGAAGAGAATTAATAATGAATTTGCAAAGAGAAGGCATGATTTTGGTCCGGTGATTTGGACAGTGGTGTCTAAAGACCGCAATATAGATATAACTATGGAAGATATCCGAAAGAAGTGCCAAATTGGCGACATAAATTGGATGGACAAAAGTAGAGATGAGAAGGTGAGGGAAATTTACAATGTCATGAAGCAAAAGAAATTCATTTTGTTCTTAGATGATATCTGGGACAAATTAGAACTGCACAGTATAGGAGTTCCACTTCCAGATGAAACCAATGAATCGAAAGTTTTGTTCACAACACGTTCCGAAGATGTGTGTGACTACATGCGAGCAAAAAAGTTCAAAGTCAGATGTTTGGAAGAGAAAGAAGCTTTTGACTTGTTTTGTAGTAGAGTGGGTGTTGAAGCTATAAACTCAGACCCTGCTATTCCAGCACTAGCAGAAAAGCTTGTGCATGAATGCAAAGGTTTGCCGCTTGCGTTGATTACAATTGGACGGGCTATGGCTGGCCGAAAGACCAAACAAGCATGGGAGCATGCTATAGAGAAGCTTAAGAGTTCCCCTTCTGAGGTTAGAGGTGTAGAGGAGGAAGTGTTCTTTATTCTTAAATTCAGTTTTGATAGCCTTCCCAACACAGATAAAGATTGCTTCTTGTATTTGGCTATGTTCCCCAATGATTATATAATTAATGTTCGTGATCTAATTCGTTTGTGGATTGGAGAGGGGTTACTTGGTGAGCATGACAATATACATAGTGCCTTTGATCATGGTGAACATATAGTTGAAAGCTTAAAGCTAGCATGTCTGCTGGAAGATGATGGAGAACGTTTTGTTAAGATGCATGATGTAATTCGAGACATGGCACTATGGCTATTTCGTAACCAAGATCGAAACAAAAATATAATTATGGTGCAATGGGACGTATTTAGAACATCACAAAGTAATAATCATGAAGCATGGAAGAATGCACAAAGGATTTCACTCATTGACATCGATTATGATGCAAAGGTCGAGAAATGGCATGTTCCAATTTGTCCCGACCTTCAAACGCTAATTGTGTGGTGGCCATTGAGACTCAGTGACGATTTTGCAAATGTTGGAATCATGCGCAAATTGAAAGTTTTGAGTTTGAGGTACTTTAAAGGGATGACCACACTTCCCGCTGAAATAGGTCAGTTAATTCACTTAGAATATCTTGAGCTATCACAGCTTGGAATTGAAGGAAAATTTCCAGTAGAGATGAAAAACTTGAATAAGCTGAGAGTATTCCTCCTGGAATTCGTTGATTGTAGTCTTGAAATCATTCCTCTGGAGGTCATATCTTGTCTTAAGAGCTTAAGAGTGTTCTTGTTTAGGGGAGACAGGCTTATTGGAAGGAGTTTTGACTGGCGATTGACTGGGTCAATGCACCGCTGTCAATCCTCTTTGGAAGAGAAATTTCCCTATTCACCCTATTTGGAAGAGGAATTATTTTTAGAGCAACTAGAGTTGCTTCCACTCTTGGAGGAGCTAAGCATCACCTTGGAGACTCCAACTGGCATCAATAAATTACTTAGTTCAACCAAGTTGCAGCGTTGCGTAAGATATGTAGGAGTTCAACCGTATGAGATGAGTGCAATCAACATTCCAATAATGACATCTATGGCAAACATGAAATGTTTGGAGGAGATACAATTGACTAGATTGCAATGGACTTTGGAAGAGTCCTCCATTAATCATGTTTACATATTTCACAACCTTAGTGTGGTTAGAATTTCGGATTGTCATTCAGTAACTCATTTGACATGGCTCATGCATGTTTCACACCTTCGAGAAATGGTAATAAGCAATTGTAATCAAGTTGAAAATGTGATAATGGAAACTGAAGACAACAAAGACAGTGAAAATATGGTTAACATATTCGCAAAGCTCGCTTCGATGATTTTGATTGATTTGCCAAAATTGAAGAGTGTCTGCAAAAAAGCCTTGCCTTGTTCGAAGCTTGAATTTGTCACTATAATGGAATGCCCAAATTTGAAGAATCTTCCTTTAAATTCTAACGTTGCACCAAAAAATTTGATAATAATGGGAGAAGCACAGTGGTGGGACAATTTAGAGTGGGAGGACCCAAAAGCTAAGAACCTATTCCAGACTAAATTTCTGAAGCTTTGCGAGTAG 2733 0.3974 MDLVATIWDATKCLCDCTAKHAAFISHLEENLQSLAEQWTELQNLTQDVNVRVQRAETNPHMRRTKEVDGWLQSVNYMEQTIEDIKKRGDKVARDKCLGKFCHKNCLSSYNLGAEIVKAQGRLKDLMDKGQKFHSEANIAYELPREPVDEMPVPNTVGMDLILEKVWDSIEDRNVGIIGLYGMGGAGKTTLMKRINNEFAKRRHDFGPVIWTVVSKDRNIDITMEDIRKKCQIGDINWMDKSRDEKVREIYNVMKQKKFILFLDDIWDKLELHSIGVPLPDETNESKVLFTTRSEDVCDYMRAKKFKVRCLEEKEAFDLFCSRVGVEAINSDPAIPALAEKLVHECKGLPLALITIGRAMAGRKTKQAWEHAIEKLKSSPSEVRGVEEEVFFILKFSFDSLPNTDKDCFLYLAMFPNDYIINVRDLIRLWIGEGLLGEHDNIHSAFDHGEHIVESLKLACLLEDDGERFVKMHDVIRDMALWLFRNQDRNKNIIMVQWDVFRTSQSNNHEAWKNAQRISLIDIDYDAKVEKWHVPICPDLQTLIVWWPLRLSDDFANVGIMRKLKVLSLRYFKGMTTLPAEIGQLIHLEYLELSQLGIEGKFPVEMKNLNKLRVFLLEFVDCSLEIIPLEVISCLKSLRVFLFRGDRLIGRSFDWRLTGSMHRCQSSLEEKFPYSPYLEEELFLEQLELLPLLEELSITLETPTGINKLLSSTKLQRCVRYVGVQPYEMSAINIPIMTSMANMKCLEEIQLTRLQWTLEESSINHVYIFHNLSVVRISDCHSVTHLTWLMHVSHLREMVISNCNQVENVIMETEDNKDSENMVNIFAKLASMILIDLPKLKSVCKKALPCSKLEFVTIMECPNLKNLPLNSNVAPKNLIIMGEAQWWDNLEWEDPKAKNLFQTKFLKLCE 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1011 910 PRINTS Disease resistance protein signature 790 806 - -
Dere11g1011 910 PRINTS Disease resistance protein signature 177 192 - -
Dere11g1011 910 PRINTS Disease resistance protein signature 346 360 - -
Dere11g1011 910 PRINTS Disease resistance protein signature 253 267 - -
Dere11g1011 910 FunFam Probable disease resistance protein At1g63360 398 482 - -
Dere11g1011 910 FunFam Probable disease resistance protein At5g66910 310 397 - -
Dere11g1011 910 Gene3D - 398 481 IPR036388 -
Dere11g1011 910 Coils Coil 25 45 - -
Dere11g1011 910 Gene3D Ribonuclease Inhibitor 530 671 IPR032675 -
Dere11g1011 910 Gene3D - 137 310 IPR027417 -
Dere11g1011 910 Pfam NB-ARC domain 163 399 IPR002182 GO:0043531
Dere11g1011 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 412 IPR027417 -
Dere11g1011 910 Gene3D - 311 397 IPR042197 -
Dere11g1011 910 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 877 - -
Dere11g1011 910 FunFam Probable disease resistance protein At1g61300 140 305 - -
Dere11g1011 910 SUPERFAMILY L domain-like 471 872 - -
Dere11g1011 910 Gene3D Ribonuclease Inhibitor 682 891 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1011 Dere-ChrDere11 19409451 19412938 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1011 174 489 WRKY Transcription Factor Family AT5G45050 23.913 5.25e-11 65.1