Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0997 ATGGCAAGCAAAACAGAGATCGATAAGCTTCCAAAATACTGGTTCCGGAGGACTTATGGTGATAATCAAGAACCATCCGGAGGAATAATGACGCCATTTAGAGATACACGCACAAAATATGTTCTTTCCTTGGAAGATGCAAAATGCTGTATCTGCCTTTCGGCGTACCACAATGTTGAAGTGCTGAGAGGACTTCCTTGTGGGCACCATTTCCACAGCTCATGCATAGACCAATGGCTTCGCATTGACCCTACCTGCCCTATCTGCAAGTTCGACATTTCCAGCACCCGAAAACTTTCTTCATCATGTTTCTAA 315 0.4444 MASKTEIDKLPKYWFRRTYGDNQEPSGGIMTPFRDTRTKYVLSLEDAKCCICLSAYHNVEVLRGLPCGHHFHSSCIDQWLRIDPTCPICKFDISSTRKLSSSCF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0997 104 ProSiteProfiles Zinc finger RING-type profile. 49 90 IPR001841 -
Dere11g0997 104 SMART ring_2 49 89 IPR001841 -
Dere11g0997 104 PANTHER TARGET OF ERK KINASE MPK-1 2 97 - -
Dere11g0997 104 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 100 IPR013083 -
Dere11g0997 104 Pfam Ring finger domain 48 90 IPR001841 -
Dere11g0997 104 SUPERFAMILY RING/U-box 39 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0997 Dere-ChrDere11 19222645 19223603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0997 2 93 C3H Transcription Factor Family AT1G68070 46.392 8.32e-24 91.3