Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0994 ATGAATATGATGCGACGGCTTAAAAGCATTGCTTCTGGGCGCACTTCCATTTCATCAGATCCTGGAGGGGAGTTTACCACAAAGAGAGTTAAGGTTGATCAAGAAACTGAGGGTAAAGTACATGAGGAAACACAGTCCATTGGGAAAGTGCATGCATCAGAAGTTACTGCTGACACATCTAATGTATCTGTGGTAGCTAAAACAGAGAAATCCGGTTATGATCAGCTTCCAAAAGAGTTGAATGAAATGAAAATTCAAGACGAAAAGGGCAACAATTACAACGAAAAGGATATAGAGGCTACCATTGTGAGTGGTAATGGAACAGAAGTAGGTCAGATAATCACTACTGTTATTGGTGGTAGAGATGGACAACCAAAGCAGACAATCTCATACATGGCAGAACGTGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTTCAGGCTAAGTGTCTTGAAACTGGTGAAGCAGTTGCCATAAAAAAGGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTCCAGATTATTCGCAAGCTTGACCACCTTAATGTTTGTCAATTAAAGCACTGTTTCTTTTCAACTACTGAAAAAGATGAGTTATTCCTGAACCTAGTTTTGGAGTATGTGCCAGAAACTGTCTATAGAGTTTCAAAGCAATATATCAGGATGCACCAACATATGCCTATCATTTATGTGCAGCTGTATACATATCAGATATGTCGTGCATTAAATTATTTGCATAATGTGGTTGGTGTTTGTCATCGTGATATCAAACCCCAGAATTTACTGGTTAATTCCCAGACTCATCAACTAAAGATATGTGATTTTGGTAGTGCAAAGATGTTGGTGCCTGGTGAACCGAACATATCATACATATGTTCACGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACGGAATACACAACTGCTATTGATATATGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCCTCTGTTTCCTGGAGAAAGTGGGGTTGATCAATTGGTTGAAATCATTAAGGTCTTGGGAACACCAACAAGAGAAGAAATAAAGTGCATGAATCCAAATTACACAGAATTTAAGTTTCCTCAGATTAAAGCGCACCCATGGCATAAGGTTTTTCACAAGAGACTGCCTCAAGAAGCAGTGGATCTTGTGTCAAGGCTGCTTCAATATTCACCAAATCTACGTTGCACTGCTTTGGAAGCATGCGCACACTCCTTCTTTGATGATCTTAGAGACCCAAATACACGTCTACCCAATGGACAGCCACTACCTCCATTGTTCAATTTTAATGCTAAAGAACTGGCTGGTGCACCTGCTGAGTTATGTAATCGTCTCATTCCCAATCATGCCAGGAACTGA 1383 0.4027 MNMMRRLKSIASGRTSISSDPGGEFTTKRVKVDQETEGKVHEETQSIGKVHASEVTADTSNVSVVAKTEKSGYDQLPKELNEMKIQDEKGNNYNEKDIEATIVSGNGTEVGQIITTVIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQIIRKLDHLNVCQLKHCFFSTTEKDELFLNLVLEYVPETVYRVSKQYIRMHQHMPIIYVQLYTYQICRALNYLHNVVGVCHRDIKPQNLLVNSQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRLPQEAVDLVSRLLQYSPNLRCTALEACAHSFFDDLRDPNTRLPNGQPLPPLFNFNAKELAGAPAELCNRLIPNHARN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0994 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0994 460 FunFam Glycogen synthase kinase-3 beta 115 210 - -
Dere11g0994 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Dere11g0994 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 92 459 - -
Dere11g0994 460 MobiDBLite consensus disorder prediction 1 28 - -
Dere11g0994 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Dere11g0994 460 FunFam Shaggy-related protein kinase kappa 211 459 - -
Dere11g0994 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0994 460 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0994 460 MobiDBLite consensus disorder prediction 9 23 - -
Dere11g0994 460 SUPERFAMILY Protein kinase-like (PK-like) 130 439 IPR011009 -
Dere11g0994 460 CDD STKc_GSK3 126 418 IPR039192 -
Dere11g0994 460 Gene3D Phosphorylase Kinase; domain 1 117 210 - -
Dere11g0994 460 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0994 Dere-ChrDere11 19181022 19185926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0994 135 441 MAP Kinase Gene Family AT3G59790 33.648 1.48e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dere11g0994 Pkinase 1e-63 CL0016