Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0986 ATGAGTTTTGGGGGTTTTCTCGATAATAACTGGGGGGGCGGGGGCGGCGGCGGTGCGAGAATCGTCTCCGATATTCCTTACAGTAACGGTACCAACGATAATAGAATGCCCTCGAGTGGTACAATCTCACAGCCTCGTCTTGTCACACCCACTTTGGCCAAATCCATGTTCAACTCTCCTGGGCTCTCTCTCGCACTACAAACGAATCTTGACGAGCAACAAGGGGATGCGAATAGAATGCCTGAAAGCTACGAGCCCAGTGTTGCTGGGAGAAGAAGCAGGGAAGAAGAACGCGAAAGCAGATCTGGCAGTGATAATATGGAAGGCGCCGCTTCAGGCGACGATCAGGACGCCGCCGACAACCCTCCCAGAAAGAAACGATATCACCGACACACCCCTCAGCAAATACAAGAGCTCGAAGCTCTGTTCAAGGAGTGTCCACACCCAGATGAGAAGCAACGACTAGAACTGAGCAGAAGGCTTTGCTTGGAAACCAGGCAGGTGAAATTTTGGTTCCAAAATCGAAGAACCCAAATGAAGACCCAATTGGAACGCCATGAGAACAATTTGCTCAGGCAAGAGAACGATAAACTCAGAGCAGAAAACATGTCCATAAGAGAGGCCATGAGGAATCCTATATGTTCAAACTGTGGAGGCCCGGCCATAATAGGCGAGATTTCGCTCGAAGAACAACATTTAAGGATTGAAAATGCCCGATTAAAGGACGAGCTAGACCGAGTTTGTGCTCTCGCGGGAAAGTTTCTTGGTCGACCCATTTCTTCGTTGACTAGCCCAATGGGTCCTCCATTGCCGAACTCAAGCTTAGAACTAGGAGTCGGGAGTAATGGTTTTGGTGGTATGAGCACCGTGCCTACGACATTGCCTCCGGGGCCTGATTTTGGCATGGGGATTTCGAGCCAACTAGCCATGGTGTCTCCGACGACGATGACCAGACCGGCGGGGCCTGTGGTGGGTGGGCTTGATAGGTCCATAGAGAGGTCTATGTTTCTGGAGCTTGCTTTGGCAGCCATGGACGAGCTGGTGAAGATGGTGCATACTGACGAGCCTCTTTGGTTAAGAGAAGAAGGAGGAAGAGAGATTCTAAACCATGAGGAGTACATGAGGACATTCAGTACTCCTTGCATTGACTTGAGACCCAATGGGTTCGTTTCCGAGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCCTGGCCCTCGTTGAGACTCTCATGGATTCAAATCGATGGGCGGAAATGTTTCCTTGTTTGATTGCAAGAACCACCACCACTGAAGTGGTGTCTGGTGGAATAAATGGAACCAGAAATGGTGCACTCCAACTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTTCCTGTTCGTGAGGTGAATTTCCTTCGGTTTTGCAAGCAGCACGCAGAGGGGGTGTGGGCTGTGGTAGATGTGTGCATAGACACTATCCGAGAAACTTCTGGAACACCCACTTTTGTGAACTGCAGGAGGCTTCCTTCTGGGTGTGTGGTACAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGACGAGAGTCAAGTCCACCAACTCTATAGATCCTTGTTAAGCTCTGGCATGGGCTTCGGTGCTCAACGGTGGGTCACCACCCTTCAACGGCAGTGCGAGTGCCTCGCCATTTTAATGTCCTCCTCCGATCCCGCTCGAGACCACACCGCCATTACCGCCGGTGGCCGGCGAAGCATGCTAAAGCTAGCTCAGCGCATGACCAACAACTTCTGTGCCGGAGTGTGCGCTTCCACGGTGCACAAATGGAACAAGCTCAACGCCGGCAACGTCGACGAGGACGTGCGGGTGATGACCCGGAAGAGCGTGGATGATCCCGGTGAGCCGCCGGGGATAGTTCTGAGCGCGGCCACCTCCGTTTGGCTTCCAGTTTCACCCCAGAGACTGTTCGATTTCCTACGTGATGAACGACTCCGAAGTGAATGGGATATACTCTCAAACGGTGGGCCTATGCAGGAGATGGCCCACATCGCCAAAGGCCAAGACCACGGCAATTGCGTCTCCCTCCTACGAGCCAGTGCGATGAATGCGAACCAGAGTAGCATGCTGATACTGCAGGAGACATGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCGCCGGTCGATATCCCGGCCATGCACGTCGTGATGAACGGCGGCGACTCGGCTTACGTGGCGCTGTTGCCGTCGGGGTTCGCTATTGTCCCTGACGGGCCGGGGTCGCGTGGCTCCCAAGCGCCGGCGAGTAATGCAAATGGAAACGGCAGCGTTCAGCAGAGAGTAAGTGGGTCCCTCCTAACGGTGGCGTTTCAAATCCTTGTGAATAGCCTCCCCACGGCCAAGCTCACGGTGGAATCGGTGGAGACGGTGAACAACCTCATCTCGTGCACCGTTCAGAAGATAAAAGCCGCGCTTCACTGTGAAAGCTGA 2493 0.5315 MSFGGFLDNNWGGGGGGGARIVSDIPYSNGTNDNRMPSSGTISQPRLVTPTLAKSMFNSPGLSLALQTNLDEQQGDANRMPESYEPSVAGRRSREEERESRSGSDNMEGAASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENNLLRQENDKLRAENMSIREAMRNPICSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTSPMGPPLPNSSLELGVGSNGFGGMSTVPTTLPPGPDFGMGISSQLAMVSPTTMTRPAGPVVGGLDRSIERSMFLELALAAMDELVKMVHTDEPLWLREEGGREILNHEEYMRTFSTPCIDLRPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCLIARTTTTEVVSGGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVCIDTIRETSGTPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRSLLSSGMGFGAQRWVTTLQRQCECLAILMSSSDPARDHTAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQAPASNANGNGSVQQRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0986 830 CDD homeodomain 124 182 IPR001356 GO:0003677
Dere11g0986 830 FunFam Homeobox-leucine zipper protein GLABRA 2 338 561 - -
Dere11g0986 830 SUPERFAMILY Homeodomain-like 111 182 IPR009057 -
Dere11g0986 830 SMART HOX_1 123 186 IPR001356 GO:0003677
Dere11g0986 830 Pfam START domain 338 562 IPR002913 GO:0008289
Dere11g0986 830 SUPERFAMILY Bet v1-like 590 823 - -
Dere11g0986 830 Pfam Homeodomain 125 180 IPR001356 GO:0003677
Dere11g0986 830 MobiDBLite consensus disorder prediction 72 132 - -
Dere11g0986 830 Gene3D - 111 198 - -
Dere11g0986 830 SUPERFAMILY Bet v1-like 331 562 - -
Dere11g0986 830 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 121 827 IPR042160 -
Dere11g0986 830 MobiDBLite consensus disorder prediction 26 45 - -
Dere11g0986 830 ProSiteProfiles START domain profile. 329 565 IPR002913 GO:0008289
Dere11g0986 830 Coils Coil 176 211 - -
Dere11g0986 830 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Dere11g0986 830 CDD START_ArGLABRA2_like 333 561 - -
Dere11g0986 830 FunFam Homeobox-leucine zipper protein HDG1 112 198 - -
Dere11g0986 830 SMART START_1 338 562 IPR002913 GO:0008289
Dere11g0986 830 MobiDBLite consensus disorder prediction 88 104 - -
Dere11g0986 830 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0986 Dere-ChrDere11 18932306 18937582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0986 1 830 Homeobox Transcription Factor Family AT3G61150 65.000 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere11g0986 START 1.7e-54 CL0209