Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0967 ATGACTTCGGAAGCATTATTGAGATTTCGAGACCAAACGTCCCTGTTCGGCTACCTCGGCTTGGAGATCTCAACTTTAACTGCTATTCCTAATCTAGTACATCTCGGTCTTGGTGGAATGATGCTGACAGGTTCCATTTCAACTCAGATAGGAGCTCTTAAAAAGCTCAACTATCTAGATTTGTCCTACAACCTTATTGGTGAGATACCTTCGACTCTTGCAAAACTCACTCAGCTTGACGCACTAGACTTGTGTGGCAACAAATTTAGCGGAGCCTTTTTTTCATTTTTAGGTTTTATAACCAGTCTCACCAATATTTGGTTGTCCACAAATATGTTTACTGGTGAGATCCCTTCTTCAATTTCAAATTTGACCAAGTTAGTAATGCTCGATGTTTCTCAGAATCAAATTTCTGGTCCTATTCCTTTGTTTTTAATCAACGTGATTTGCTTGGAAACTTTAGTCACAGCAAGATCAGTGGAGAGATACCATCTAGGTTATGCTTTAATCTGGCGCATGAGGGTAAACGCCATTAAAGGAATCGCAAATGCTTTGTCCTACATGCACCATGATTGTTCTCCCAAAATTATCCATCGAGACATAACAAGCAGCAATGTTCTATTGAACTCAAAGATGGAGGCTTTTCTCTCAGACTTTGGCATAGCCAGAATCCTTGATCCTGATTCCTCCAATCAAACTCTTCTAGTTGTTACTTATGGTTACATTGCTCCAGGTTAA 738 0.3984 MTSEALLRFRDQTSLFGYLGLEISTLTAIPNLVHLGLGGMMLTGSISTQIGALKKLNYLDLSYNLIGEIPSTLAKLTQLDALDLCGNKFSGAFFSFLGFITSLTNIWLSTNMFTGEIPSSISNLTKLVMLDVSQNQISGPIPLFLINVICLETLVTARSVERYHLGYALIWRMRVNAIKGIANALSYMHHDCSPKIIHRDITSSNVLLNSKMEAFLSDFGIARILDPDSSNQTLLVVTYGYIAPG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0967 245 ProSiteProfiles Protein kinase domain profile. 29 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0967 245 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 244 - -
Dere11g0967 245 Pfam Leucine rich repeat 31 89 IPR001611 GO:0005515
Dere11g0967 245 ProSiteProfiles Leucine-rich repeat profile. 55 77 IPR001611 GO:0005515
Dere11g0967 245 SUPERFAMILY Protein kinase-like (PK-like) 165 244 IPR011009 -
Dere11g0967 245 Gene3D Transferase(Phosphotransferase) domain 1 161 245 - -
Dere11g0967 245 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 72 159 - -
Dere11g0967 245 Gene3D Ribonuclease Inhibitor 14 160 IPR032675 -
Dere11g0967 245 SUPERFAMILY L domain-like 16 154 - -
Dere11g0967 245 ProSitePatterns Tyrosine protein kinases specific active-site signature. 196 208 IPR008266 GO:0004672|GO:0006468
Dere11g0967 245 Pfam Protein kinase domain 176 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0967 Dere-ChrDere11 18521120 18522790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0967 158 245 Receptor kinase-like Gene Family AT4G08850 53.409 4.90e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g0967 Pkinase 6.3e-13 CL0016