Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0959 ATGTGGACCCCACTCCCATTAGTCCGCTTAAATAACCAAACGCTCTTTCCTTCTCCTTTCGTACACGTCGTTGGGTGCTTCCAAATCCAGAGCCTTTCGAGCTTTCCACTACCACTTCTACAAATCTTGTTCCATTCTAACTCGAGTTTCTACCTTCTCTTTACCCTTAAATTTCCACTGAAGATTCTTTCAATCTTGTTTTCAGCTTCCGGTGTCCTTTTCTCTTTTGGGTTTTTGATTCTTCCAAACATGGCTGCTCTTCAGAAACGCGGAGTTGAACAGGACGGAGACCCAGGAAATGTTGATCTTAGGCTTCACCGCGGCGGCGGCGGCGGAGGGGGGCCCGCGAAGGGATGGATGAAGGGACCCAAAGAAGAGCTGGAAATGGAAGAGGGGTCGCCGGCGGCGATAAAGGTTATGCCGGTGGCGGTGCACGTCCCGCAAAAGAGGGCGTTGACGAAGGACCGGCACACGAAGGTGGAGGGACGAGGCCGGAGGATCCGAATGCCCGCCACTTGTGCCGCTCGGATCTTCCAGTTGACCCGGGAGCTGGGTCACAAGTCCGACGGAGAAACCATCCGGTGGCTCCTTGAACACGCGGAGCCCGCCATCATCGCCGCCACCGGCACTGGCACCGTCCCGGCCATCGCCATGTCCGTTAATGGGACCCTTAAGATTCCAACCACCCCTTCCAACATACCCGCCACCAAGAACAACAACAAACCTGAACCCGACGACCCACCCGAAGGGAGGAAACGAAAGAGATCAACGAACAGTGCGCACGTCGACTTAAACGACGGCGTTTCAGTCGCCGCCGGCCTCGCTCCTGTAACAACAACGGAGACGACAACGAAGTCAACAATTCCAACGGTTAATCCTCCCCCACAAGCAGTAATTCCGTTAGCGCAAGGACTGGTCCCCATGTGGGCGATACCATCAAATGCCGTCGTCCCGCCCGGGACGTTCTTCGTAGTCCCACCTATGGCTTCCATAGCCGGACCTTCAACAAGCCAGCCACAGCTTCTGACCATCCCTGCCAATGCGACGCCTCTGATGAACATCTCGGCGAGACCCATATCGGCTTTCGTCTCGTTAATGGCGAATATCGTAGCGCCTGTTCAGTTCCAAGCAGCAGCAACAACAGCTCCTCGCTGTTCCACTGCTCCGTCTCTGAAATCACCAACAAAAGCGACGATTCTTGCACCGTGCTCAAGCTCTAGTGCTACCTCCTCAAGCACGGCCCAGATGCTACGAAATTTCTCATTGGAGATATGCGATAAGCAGGAGCTTCAGTTCATGTCCCGCTCTTCAAAGCCCTGA 1320 0.5477 MWTPLPLVRLNNQTLFPSPFVHVVGCFQIQSLSSFPLPLLQILFHSNSSFYLLFTLKFPLKILSILFSASGVLFSFGFLILPNMAALQKRGVEQDGDPGNVDLRLHRGGGGGGGPAKGWMKGPKEELEMEEGSPAAIKVMPVAVHVPQKRALTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTPSNIPATKNNNKPEPDDPPEGRKRKRSTNSAHVDLNDGVSVAAGLAPVTTTETTTKSTIPTVNPPPQAVIPLAQGLVPMWAIPSNAVVPPGTFFVVPPMASIAGPSTSQPQLLTIPANATPLMNISARPISAFVSLMANIVAPVQFQAAATTAPRCSTAPSLKSPTKATILAPCSSSSATSSSTAQMLRNFSLEICDKQELQFMSRSSKP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0959 439 ProSiteProfiles TCP domain profile. 153 207 IPR017887 -
Dere11g0959 439 MobiDBLite consensus disorder prediction 242 260 - -
Dere11g0959 439 Pfam TCP family transcription factor 153 229 IPR017887 -
Dere11g0959 439 MobiDBLite consensus disorder prediction 227 265 - -
Dere11g0959 439 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 138 389 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0959 Dere-ChrDere11 18384547 18385866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0959 147 434 TCP Transcription Factor Family AT2G45680 50.949 7.85e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere11g0959 TCP 1e-28 No_clan