Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0957 ATGGATAATTATGGGTCTTCATCACCCCACCGTTACCCGAACCCGTATGGATACCATAGTAACCCTCCTCCTCCTTATCCACCTCCAGTTTCAGATCCAATTGCACCTCCTCCTTACCCGTATCCATACAGTCATTCACACTCCTTCAACTATCCCTATCCCCCACCCCCTGGATCATCCTCCTCTGTTCCCCATTCTGGCCCCTTAGACTATAGCCGACCTACTCCGCCGTTTGACTACAGCCATTACCCTTCACCACCAGATTATAGCTATCCCCCTCCACCGGCGGACTTTAACCATCCCAGTACACCGGCAGATTTCAGCCATCCACCATCCTATTCTGCTTCCCATCCCTATCCTTATCCATACCAAGTTCCTCCAGGGATTCATGACCCTCCTCAGCCTGCCCAACTTAACAGTTTTCAATATGGGTTACCTCATTACCATTCCCAACAAGCTGAAGCAGACCATTCTCCTCAAAACCAACCCATGGTCCATTCGCGTGCCAATAGCTTCTCGGGTCCCCACCAGCATGAGAGCCAGATCACTTCTGGAGTTGTATCATTGCAAACTAGTAGTAGTTTTAAGCCATCTCGGACTTCTGCATACCCACCTTTGGATGATCTTATGAGCAATGTTCGCTTGTCTGATAACCAGCAAACTGCTCCTGCATCACCCCCTGCACCTGTAGTGCAGCAACTAGGGCATTCCATTTCAGTTCCAAAACGAGATAAACAAGAGGAGTTTTACGGTTATCCTAATAACTCCTTCTCAGGATGGGGATCCTCCTACTCTGGTCGGGTGGATTCATCTAAACTTTCATCTAATTCAGGCTCATTTAATGATTCGCTGCATAGTCAGAGTCTGCAGATTGTTCCATCACATAATAAAGGGTCATTGAAAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCGCGAAGCCAAGAATCTTCCAAATATGGACATGTTCCACAAAACTTTGGGAGATATGTTTGGTAGATTACCTGGGAATATGGGCAACAAAATTGAAGGAACTATGAAGATTACTAGTGACCCTTACGTAACAATTTCGGTATCCAATGCTGTAATTGGTAGGACTTATGTGATTAGCAACAGTGAAAATCCTGTGTGGATGCAGCATTTTCATGTTCCTGTTGCACATTGTGCTGCTGAAGTGCATTTTGTTGTTAAAGACAGTGATGTTGTAGGTTCACAGCTCATTGGCATTGTGTCAATTCCTGTGGAACAAATATACTTGGGGGAAAGAATAGAAGGGACCTATCCTGTCCTGAATAATAGTGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGCTTATCAATTCAGTACATCCCAATTGAGAAACTGAGCATTTATCATCAAGGGGTCGGAGCAGGACCAGACTACACTGGGGTTCCTGGTACTTATTTTCCTCTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCCCATGTTCCAGATGGGTGCCTCCCTAATTTCGTACTTGACCATGGGAAGTATTATGTGCATGGAAAATGTTGGCATGACATCTTTGATGCCATACATCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTATGGCACAAAGTTCAGTTGGTAAGGGATGCTGGTAATCCATCAAGTTACACACTAGGTGATCTACTACGGTCCAAATCGCAGGAAGGAGTAAGAGTACTTCTCCTTATTTGGGATGATCCTACGTCAAGGAACATTCTTGGTTATAGAACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAACAATCTTCTGTGCAAGTTCTACTTTGTCCACGCATTGCAGGAAAACGACATAGCTGGGTCAAGCAAAAGGAAGTTAGTACTATATATACACATCACCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAATAGACGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGATGGCCGATATGATACTCCCCACCATCCTCTCTTTAGGACGCTCCAAACACTGCACAAGGGTGACTATCACAACCCTACTTTCACGGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGCCCAGCAGCTTATGATGTTCTATACAACTTTGAGGAGCGTTGGTTAAAAGCTGCAAAACCTCATGGCATAAAAAAGTTGAAAGCTTCATATGATGATGCTTTGCTTAGGCGGGACAGAATTCCAGATATTATCACCTTGTCTGATGCTCTTAGCGTTAGTGAGAATGATCCTGAAGCTTGGCATGTTCAGATATTTCGGTCAATTGATTCAAATTCTGTTAAGGGGTTTCCCAAGGATCCGAAAGATGCTACAAGCAAGAACTTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCATTACATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTAAAGATTGCTGAAAAGATAAGGGCAAATGAGCGATTTGCTGTGTATATTGTTATTCCAATGTGGCCTGAGGGTGTTCCCACAGGGGCTGCCACGCAAAGGATTTTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGCTGAGGCTGGGCTTGAAGAGGCATTCTCACCAGAAGACTATTTGAACTTTTTCTGTCTTGGCAATCGGGAGGTCAATGACATGTATGGTAATAATGCAACACCTGGAAATCCTCCTCCAGCAAATAGTCCACAGGCACTAAGTCAAAGCAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGACGAATATGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTCATTATACCTGGGCAAGGAGACAGTCTTATCCACGTGGACAGATACATGGATATAGGATGTCACTTTGGGCAGAACACACGGGAACATTTGAGGACTGCTTCTTGCAACCGGAGAGCCTTGAATGTGTAAGAAGAGTAAGGGCGATGGGTAAGATGAACTGGACACAATTTGCAGCCGCAGAAATAACAGAGATGAAAGGGCACCTACTCAAATACCCAGTAGAAGTTGATCGGAAGGGAAGGGTTGGATCCCTTCCTGACAATGAGAATTTCCCTGATGTGGGAGGCAAAATAATCGGATCATTTCTTGCCATTCAGGAGAATCTTACCATATGA 3360 0.4378 MDNYGSSSPHRYPNPYGYHSNPPPPYPPPVSDPIAPPPYPYPYSHSHSFNYPYPPPPGSSSSVPHSGPLDYSRPTPPFDYSHYPSPPDYSYPPPPADFNHPSTPADFSHPPSYSASHPYPYPYQVPPGIHDPPQPAQLNSFQYGLPHYHSQQAEADHSPQNQPMVHSRANSFSGPHQHESQITSGVVSLQTSSSFKPSRTSAYPPLDDLMSNVRLSDNQQTAPASPPAPVVQQLGHSISVPKRDKQEEFYGYPNNSFSGWGSSYSGRVDSSKLSSNSGSFNDSLHSQSLQIVPSHNKGSLKVLLLHGNLDIWVREAKNLPNMDMFHKTLGDMFGRLPGNMGNKIEGTMKITSDPYVTISVSNAVIGRTYVISNSENPVWMQHFHVPVAHCAAEVHFVVKDSDVVGSQLIGIVSIPVEQIYLGERIEGTYPVLNNSGKPCKPGAVLSLSIQYIPIEKLSIYHQGVGAGPDYTGVPGTYFPLRKGGNVTLYQDAHVPDGCLPNFVLDHGKYYVHGKCWHDIFDAIHQARRLIYITGWSVWHKVQLVRDAGNPSSYTLGDLLRSKSQEGVRVLLLIWDDPTSRNILGYRTDGVMATHDEETRRFFKQSSVQVLLCPRIAGKRHSWVKQKEVSTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHKGDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLYNFEERWLKAAKPHGIKKLKASYDDALLRRDRIPDIITLSDALSVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALAEAGLEEAFSPEDYLNFFCLGNREVNDMYGNNATPGNPPPANSPQALSQSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARRQSYPRGQIHGYRMSLWAEHTGTFEDCFLQPESLECVRRVRAMGKMNWTQFAAAEITEMKGHLLKYPVEVDRKGRVGSLPDNENFPDVGGKIIGSFLAIQENLTI 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0957 1119 SUPERFAMILY Phospholipase D/nuclease 472 729 - -
Dere11g0957 1119 FunFam Phospholipase D delta 506 744 - -
Dere11g0957 1119 Gene3D C2 domain 302 439 IPR035892 -
Dere11g0957 1119 Pfam Phospholipase D Active site motif 966 992 IPR001736 GO:0003824
Dere11g0957 1119 Pfam Phospholipase D Active site motif 631 665 IPR001736 GO:0003824
Dere11g0957 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 630 665 IPR001736 GO:0003824
Dere11g0957 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 965 992 IPR001736 GO:0003824
Dere11g0957 1119 MobiDBLite consensus disorder prediction 151 183 - -
Dere11g0957 1119 MobiDBLite consensus disorder prediction 16 31 - -
Dere11g0957 1119 MobiDBLite consensus disorder prediction 79 100 - -
Dere11g0957 1119 MobiDBLite consensus disorder prediction 115 133 - -
Dere11g0957 1119 ProSiteProfiles C2 domain profile. 285 429 IPR000008 -
Dere11g0957 1119 FunFam Phospholipase D 778 1011 - -
Dere11g0957 1119 SMART C2_3c 308 428 IPR000008 -
Dere11g0957 1119 Pfam C2 domain 307 431 IPR000008 -
Dere11g0957 1119 MobiDBLite consensus disorder prediction 52 137 - -
Dere11g0957 1119 SUPERFAMILY Phospholipase D/nuclease 791 1051 - -
Dere11g0957 1119 SMART pld_4 965 992 IPR001736 GO:0003824
Dere11g0957 1119 SMART pld_4 630 665 IPR001736 GO:0003824
Dere11g0957 1119 PANTHER PHOSPHOLIPASE D 297 1110 IPR015679 -
Dere11g0957 1119 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 305 454 IPR035892 -
Dere11g0957 1119 Gene3D Endonuclease Chain A 774 1019 - -
Dere11g0957 1119 MobiDBLite consensus disorder prediction 1 31 - -
Dere11g0957 1119 FunFam Phospholipase D delta 302 447 - -
Dere11g0957 1119 Pfam Phospholipase D C terminal 1039 1109 IPR024632 -
Dere11g0957 1119 CDD C2_plant_PLD 301 452 - -
Dere11g0957 1119 Gene3D Endonuclease Chain A 507 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0957 Dere-ChrDere11 18363948 18375683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0957 61 1119 Phospholipase D Gene Family (Wang group) AT2G42010 69.231 0.0 1470
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0957 11 18363948 18375683 Dere11g0957 11 18363948 18375683 ECH