Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0928 ATGAACGAGGAAAACACGGAAGGCAAGATAAAGTGTTGCTGCATTTCCCACGAGTTCTTCCGAGTAGCTTCAGCAAACCATAACAAAATTGCAGTAATCCATGCTTCCGGCGTGGCCCAGCTTTCCAGAGAACTTCGTGAAAATTCTAGTTCATACAATATTGATGGAGACATTGTTAAATTCTTAGACAAGCGCGTGGAATCAATTTCTCCTCCCGTGTACTCTGGGGACCGTAGCTACACGTACTCTGATTTGTCGAAAGCCGTTCACTCCCTTAGTTCTTGCCTTCGCTCTATCTTGCTTGGTGGTGTGTATGACCCCCATTTGATGAGACCCAAAGCTCAAGGTAATACTGACGTCAAGAATAGAGAACTAAGAATTTTTGAAACACCCAAGTCATCAGAAATTGTCATGACAAGTGCTGAAACAATGGCTGACCCAAATAAAGAGTATAGACCAAAGATAGTGGGAATATATATGCCACCTTCGGTAGAATACATTGTTGCTGTTCTTTCTGTTTTGAGGTGTGGGGAAGCATTCTTGCCTCTGGATCCTTTTTGGCCAAACGGAAGGATACTATCAATTGTTTCTTCATCAAAAGCTGATCTAATTATAGCGTCCCAATCTTCATTTTGTAAAAGTAACTCGGATCAGCTTGATGAATCACATTGGCTTGTACATTCATGCAGTTCTCCAATTTTAAACTTCTCCATGGAAGAAAACCTTAAAGAGTGTCCAACAGATTTGGCATGGCCTTGTGAGAATGAAAGAAAGAGATCATTCTGTTATCTGATGTACACTTCAGGATCGACTGGAAAGCCTAAAGGAGTATGTGGCACTGAACAAGGTCTATTGAATCGCTTTTTCTGGATGCAAGGAAGGTATCCACTGGATGGACAAGATTTACTGCTGTTTAAGTCATCAATTAGCTTTGTTGACCACCTGCAAGAATTTCTCAGTGCTATTTTGACTGCTTGTGTGCTAGTTATTCCTCCTTTCTGTGAGCTAAAAGACAATGCATATTCTCTGATAGATTTTCTGCAGGCTTATTTTATTAATAGGCTTACAGCTGTTCCATCACTAATGAGGACAATTATTCCTGGATTGCAAAATCGTGCTGATATGCGGGTTCAAAGTTCATTGAAATTGCTTGTGCTGAGTGGCGAAAATTTTCCTTTAACCATGTGGGAGATGCTTTCTACTATGTTGCCAAATACATCAATCTTGAATTTATATGGAAGTACTGAGGTCTCTGGGGATTGTACATATTTTGATTGTAAGAGGATGCCGTTGATTTTGAAGTCAGAGATACTATCTAGTGTGCCAATTGGTTTGCCTATTTCCAACTGCGATGTGCTGCTTCTTGCAGAAAATGATGCATCAAATGAGGGAGAGTTATATGTTGGGGGGTCCTGTATTTCTAGAGGCTACTATAATGTTCCCAATTTAATGTCTCATGACTTAGTAAAATTGCCTCAAAGTTATAGTTGCAGTGGTTCTGTTGACAGTTGCCAAAACAAGTTATACTTTAGAACTGGTGATTTAGCCAAAAAGTTACCAAGTGGTGATTTTATATTTTTGGGTAGAAAAGACCGCATTGTGAAAGTCAATGGACAGCGTATTGCCCTGGAAGAAATTGAAAATTTACTAAGGGAACACCCAGATATAAATGATGCTGCTGTAATCTGTCGAAATAATCGAGGAGAACTTGTGCTTCTGGAAGCATTTATAATATTAAATGATGCAGAAAGGCCGGGCGAATTATTATTACCTTCAATCAGAAGTTGGATGACTAACAGCCTTCCATCAGTTGTGGTTCCTAATCGTTTCATCTTTACAGAATCATTTCCTCTGTCTTCCAGTGGTAAGGTTAATCATAAGTTGTTGGCAGGTTCAACTTTATTCACCAAACATGTTGAGGATAAGGTTGGTAGCATAGGATGCAGTGATCTTCTACAACTTATCAAGAAGGCATTTTGTGATGCTTTAATGATCGAAGAGCTTTGCAGTGATGATGATTTCTTTAAGATGGGTGGGAACTCTCTTGCTGCTGCACATGTTGCTCACAATCTGGGGATTGATATGAGATTTCTTTATTATTTTCCATGTCCTTTTAAGCTATGTATGGCTCTTCTACAGAAAAGGGGATCATGCTCTTTGCATGATGACCTGGATACTTGTTCAAAACTAAATGTAGACGGACAAAGTAACATATTTTCTTCCAATCTTTCTGAAAATGCTAATATGCTTCTCCTTGAACCACGGGGGATTTCTGATGATGGCAACAGTTCTTTTCCTACTAAACGCTTGAAAAGGGATCTTACCACTGACATTAAATCAGCGGGTGATGGATCTATCCCATGGTGTTCTTCCTCAATTTCTTTATCATGTGCAATTAGCCGGTGCAACAAGGTATTTTGTAAAGGGCAGCCTGGAGTAATTGATACGCATCAAACAAGTTGGTCTCTGAAAATTTCAAGAAGTAGAAGAGGCCATATGAGAGACTTATGGAAAGTTTATATGGAATCTTGTGTTGATGCATCACCAATGCTTGTGTTTAAAAGCTCAGATATTTATTTGTTCATTGGATCTCACTCATACAAATTTTTCTGTATAAATGCCAGAAGTGGTTCCGTTCAGTGGGAGATCGAACTAGAAGGACGAATTGAATGTTCTGCTGCAATTGTTTCTGATTTTTCCCAGGTGGTTGTTGGATGTTACAGGGGGAAAATATATTTTCTTGATTTTTCAAATGGAAACATATGTTGGAGTTTTCAAACATCTGGAGAGGTAAAATCACAACCAGTTGTAGATACAAGCAGACAACTGATATGGTGTGGCTCACATGACCATAACTTATATGCTCTTGATTACAAAAACCATTGCTGTGTCTATAACCTACCATGTGGAGGCAGTATATTTGGGTCACCTGCAATTGATGAGGTTCGTGGTGCACTTTATGTAGCTTCTACTAGTGGCCGTGTGACAGCTATATCGATTGGGGATTTCCCATTTAATATTTTGTGGCTCCATGAGTTAGAAGTCCCAGTTTTTGGTTCTCTAGTTGTCACTCAGAATGGAATTGTTATATGTTGCTTGGTAGATGGCCATGTTCTGGCATTGGATCCAGATGGATCCATACTTTGGAAGAAAACAACTAATGGCCCAATATTTGCTGGAGCATGCGTATCTTCTGCTCTTCCATCTGAGGTGCTTGTATGTGCCAGAAATGGAAGTGTGTACTCATTTAATCTGGACAAGGGAGATCTACAATGGGAATACAATGTTGGAGATCCAATTACTGCATCTGCATTTGTTGACGAGCACTTGCAGCTAGAGTCTGATTTCCCCCAATATTTAGACAGGTTAATTTGCATTTGTTCCAGTTCTGGAGGCATACGCATTCTTCGAGTTCAAGTGAACTTGAATGTCACCAAAGATGCAAATCAGCAAAGAATTATTGTGGAGGAATGTGCTAAACTAAATTTGCCGGGAGATATATTCTCTTCACCTGTAATGATTGGTGGCAGGATTTTTGTTGGTTGTAGGGATGATTACTTGCACTGCATTGCCCTTGAAATTCCAAGTGAAATTTGA 3597 0.3953 MNEENTEGKIKCCCISHEFFRVASANHNKIAVIHASGVAQLSRELRENSSSYNIDGDIVKFLDKRVESISPPVYSGDRSYTYSDLSKAVHSLSSCLRSILLGGVYDPHLMRPKAQGNTDVKNRELRIFETPKSSEIVMTSAETMADPNKEYRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNGRILSIVSSSKADLIIASQSSFCKSNSDQLDESHWLVHSCSSPILNFSMEENLKECPTDLAWPCENERKRSFCYLMYTSGSTGKPKGVCGTEQGLLNRFFWMQGRYPLDGQDLLLFKSSISFVDHLQEFLSAILTACVLVIPPFCELKDNAYSLIDFLQAYFINRLTAVPSLMRTIIPGLQNRADMRVQSSLKLLVLSGENFPLTMWEMLSTMLPNTSILNLYGSTEVSGDCTYFDCKRMPLILKSEILSSVPIGLPISNCDVLLLAENDASNEGELYVGGSCISRGYYNVPNLMSHDLVKLPQSYSCSGSVDSCQNKLYFRTGDLAKKLPSGDFIFLGRKDRIVKVNGQRIALEEIENLLREHPDINDAAVICRNNRGELVLLEAFIILNDAERPGELLLPSIRSWMTNSLPSVVVPNRFIFTESFPLSSSGKVNHKLLAGSTLFTKHVEDKVGSIGCSDLLQLIKKAFCDALMIEELCSDDDFFKMGGNSLAAAHVAHNLGIDMRFLYYFPCPFKLCMALLQKRGSCSLHDDLDTCSKLNVDGQSNIFSSNLSENANMLLLEPRGISDDGNSSFPTKRLKRDLTTDIKSAGDGSIPWCSSSISLSCAISRCNKVFCKGQPGVIDTHQTSWSLKISRSRRGHMRDLWKVYMESCVDASPMLVFKSSDIYLFIGSHSYKFFCINARSGSVQWEIELEGRIECSAAIVSDFSQVVVGCYRGKIYFLDFSNGNICWSFQTSGEVKSQPVVDTSRQLIWCGSHDHNLYALDYKNHCCVYNLPCGGSIFGSPAIDEVRGALYVASTSGRVTAISIGDFPFNILWLHELEVPVFGSLVVTQNGIVICCLVDGHVLALDPDGSILWKKTTNGPIFAGACVSSALPSEVLVCARNGSVYSFNLDKGDLQWEYNVGDPITASAFVDEHLQLESDFPQYLDRLICICSSSGGIRILRVQVNLNVTKDANQQRIIVEECAKLNLPGDIFSSPVMIGGRIFVGCRDDYLHCIALEIPSEI 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0928 1198 SMART ire1_9 852 884 IPR018391 -
Dere11g0928 1198 SMART ire1_9 893 926 IPR018391 -
Dere11g0928 1198 SMART ire1_9 1021 1052 IPR018391 -
Dere11g0928 1198 SMART ire1_9 1065 1095 IPR018391 -
Dere11g0928 1198 Gene3D - 124 530 IPR042099 -
Dere11g0928 1198 FunFam Putative acyl-activating enzyme 19 1003 1193 - -
Dere11g0928 1198 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 836 1190 IPR011047 -
Dere11g0928 1198 Gene3D - 1069 1193 IPR015943 GO:0005515
Dere11g0928 1198 CDD A_NRPS 152 629 - -
Dere11g0928 1198 Pfam AMP-binding enzyme C-terminal domain 545 623 IPR025110 -
Dere11g0928 1198 ProSitePatterns Phosphopantetheine attachment site. 676 691 IPR006162 -
Dere11g0928 1198 FunFam Putative acyl-activating enzyme 19 823 1002 - -
Dere11g0928 1198 Pfam PQQ-like domain 984 1141 IPR002372 -
Dere11g0928 1198 Gene3D - 648 702 IPR036736 -
Dere11g0928 1198 Pfam AMP-binding enzyme 155 536 IPR000873 -
Dere11g0928 1198 ProSitePatterns Putative AMP-binding domain signature. 264 275 IPR020845 -
Dere11g0928 1198 SUPERFAMILY Acetyl-CoA synthetase-like 154 630 - -
Dere11g0928 1198 Gene3D - 531 639 IPR045851 -
Dere11g0928 1198 PANTHER BETA-ALANINE-ACTIVATING ENZYME 12 1193 - -
Dere11g0928 1198 Pfam PQQ enzyme repeat 902 936 IPR002372 -
Dere11g0928 1198 Gene3D - 814 1003 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0928 Dere-ChrDere11 17722816 17752476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0928 263 629 Acyl Lipid Metabolism Gene Families AT5G36880 21.658 3.95e-15 78.6