Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0927 ATGTTTATAGTCAAAGCGGAGAAGAATGTTGAAGAAGAGACGGAGGTGGTGAAAGGGCTAGAGCTCTTGTTCTATGATGGTACGTGTTGGATATTGGTCGCCGCAAAGGTCCCATTAACGGCAACTTGGTCTCTCCAACTCGGCTTCGTCCTCTCATCAAGCTCTATGAGGTTAGTTTATGAAGCCCAACCATGTCCTCCGACAATTGCTGCACTTGCTGGGGAAACAATTGTCAAAGTGGCCTGTGGAACAAATCACACAGGTGGGGTTTTGGTGGTTATGGAAGGTCAGCTAGGACATAGGGAGCAGAAGGATGATTGGGTCCTACATCGTGTAGATGTTTTCCAGAACAGAAAAGTTCTGCCTCCTAATGCTGTGATTTCAGCTGGTTCTGTGAACTCTGCATGCACTACATGTCAAACTTGGAAGGTTATTTTCTCTTCAGGTGGAGGGCAATTGTATATGTGGGGCAAAATAAAGAACACTGGTGATGACTGGATGTATCCGAAGCCTCTAATGGATTTAAGGGCTGATTCTTCATGCATCAGTTGCGGCCATGCTCAACATGTAGAATTGGGATATGGACCTAATGGACAAAACTCATTGGAAAGCAAAAGGGATGTGAATTTCTTTTGTTTAGCTTTGTTCTTCTTGTGGAGCTTAGTCTCTGGTTTGCTTTCTCCTAAAGGTGTAAACTTTGAAGGAATTCCAAGCCAGAATATTTCTGGGACTTTACCACCAAGCATTGGAAACTTGACAAATCTCCAGATTGTAGAACTTCAAATTGCTACAAATAACTTCAGTAGCAAGAACTTGATTGGCAAAGGTGGATTTGGAAATGTGTACAAAGGGTACCTCCCAGATGGTACAGTTATAGCAGTGAATAGGCTAAAAGATGACAATGCCATTGGAGGTGAGATCCAATTCCAGACTAAAGTTAAGATGATTAGCTTAGCTGTGCATAGGAACCTCCTTTGCCTCTATGGATTTTGTATAACAGCTACTGAGAGGCTCTTGGTTTATCCCTACATGTCCAATGGTAGTGTTGGTTCACGTTTTATAGGAGCTACAAGGGGCTTGCTATATTTGCATGAGCAGTGTGACCCTAGGATTATTCACAGGGATGTAAAGGCTGCAAATATCTTGCTTGATGATTACTATGAGGCTGTGGTAAGGGATTTAGGGTTGGCAAAGCTGTTGGATCACCATGATTCTCATGTGACAATAGTTGTGAAGAAGATCCATCAAGAGAAGAAGCTTGAATTGTTAGTTGACAAGGACCTAAAAGATAACTATGATAAAAATGAGCTTGAAGAAATAGTTCAAGTCGCTCTTTTGTGTACTCAGTACCTTCCTAGTCATAGACCAAAGATGTCTAAAGTGGTTCGGAAATCGAAAGCCTCACAGAGAGCTGATTCAACAAGAGGCAGAGGGAAAGAACTCTCTTCTACAGAGAGATACTCCGATCTTACTGATGACTCTTCATTGCTAGCACATGCAATGGAGCTTTCTGCACCAGGATGA 1524 0.4252 MFIVKAEKNVEEETEVVKGLELLFYDGTCWILVAAKVPLTATWSLQLGFVLSSSSMRLVYEAQPCPPTIAALAGETIVKVACGTNHTGGVLVVMEGQLGHREQKDDWVLHRVDVFQNRKVLPPNAVISAGSVNSACTTCQTWKVIFSSGGGQLYMWGKIKNTGDDWMYPKPLMDLRADSSCISCGHAQHVELGYGPNGQNSLESKRDVNFFCLALFFLWSLVSGLLSPKGVNFEGIPSQNISGTLPPSIGNLTNLQIVELQIATNNFSSKNLIGKGGFGNVYKGYLPDGTVIAVNRLKDDNAIGGEIQFQTKVKMISLAVHRNLLCLYGFCITATERLLVYPYMSNGSVGSRFIGATRGLLYLHEQCDPRIIHRDVKAANILLDDYYEAVVRDLGLAKLLDHHDSHVTIVVKKIHQEKKLELLVDKDLKDNYDKNELEEIVQVALLCTQYLPSHRPKMSKVVRKSKASQRADSTRGRGKELSSTERYSDLTDDSSLLAHAMELSAPG 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0927 507 Gene3D Transferase(Phosphotransferase) domain 1 408 487 - -
Dere11g0927 507 ProSiteProfiles Protein kinase domain profile. 267 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0927 507 Pfam Protein kinase domain 268 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0927 507 MobiDBLite consensus disorder prediction 465 487 - -
Dere11g0927 507 SMART serkin_6 267 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0927 507 Gene3D Transferase(Phosphotransferase) domain 1 344 407 - -
Dere11g0927 507 SUPERFAMILY RCC1/BLIP-II 59 214 IPR009091 -
Dere11g0927 507 Gene3D - 43 210 IPR009091 -
Dere11g0927 507 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 238 467 - -
Dere11g0927 507 SUPERFAMILY Protein kinase-like (PK-like) 244 463 IPR011009 -
Dere11g0927 507 MobiDBLite consensus disorder prediction 457 488 - -
Dere11g0927 507 Coils Coil 3 23 - -
Dere11g0927 507 FunFam Somatic embryogenesis receptor kinase 1 241 343 - -
Dere11g0927 507 Gene3D Phosphorylase Kinase; domain 1 241 343 - -
Dere11g0927 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0927 Dere-ChrDere11 17702117 17712137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0927 248 506 Receptor kinase-like Gene Family AT5G16000 54.203 1.21e-98 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere11g0927 Pkinase 1.7e-16 CL0016