Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0920 ATGGAGTCCAAGGCTTGGGGTGATGTGTTGGATTCATTTCTCAGACAAATGGAAGATGACAATCCTGATCAATTGAGCCGTTTCGATGTGGTGCATTTATTTGGGGATTTGCTGGTTGCTGGGGTGGACACAACATCAAACACTGTGGAATGGGCAATGGCAGAGCTATTAGGTAAGGCAGAGAAGCTAGAAAAAGCCAAAAATGAGCTTCAACGAGCCATTAGTGGCAAAGACATGAAACTTGAAGAATCACACATCTCAAAACTGCCTTTTCTAAGGGCAGTGGTGAAGGAAACTCTTCGCTTGCACCCACCAGCTCCATTGTTAATACCTCACAAGGCACAAGATGATTATGAAATTTGTGGCTTCACAGTGCCTAAAAATGCACAAATTTTCATCAACACTTGGGCTATAGGAAGAGACTCAAGCATTTGGTGTAACCCTAATCAGTTCATGCCTGAAAGATTTTTGGAGAGTGAAATTGATTTCAAAGGTCGTGATTTTGAGCTCATTCCCTTTGGAGCAGGCAGAAGAATGTGCCCTGGGATGCCATTGGCTTCTAGGTTAGTTCATTTAATGTTAGCCTCTCTTATCTACTACTATAATTGGAAGCTTGCTGATGGGGTCCAACCTAATGAAATAGATATGGAGGAAAAGTTTGGGGTTACCTTAAGAAGGGTTAAGCCTCTCAGAGCCACTCCTACCAAAACTTCAAATTATTATTAA 726 0.4201 MESKAWGDVLDSFLRQMEDDNPDQLSRFDVVHLFGDLLVAGVDTTSNTVEWAMAELLGKAEKLEKAKNELQRAISGKDMKLEESHISKLPFLRAVVKETLRLHPPAPLLIPHKAQDDYEICGFTVPKNAQIFINTWAIGRDSSIWCNPNQFMPERFLESEIDFKGRDFELIPFGAGRRMCPGMPLASRLVHLMLASLIYYYNWKLADGVQPNEIDMEEKFGVTLRRVKPLRATPTKTSNYY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0920 241 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 173 182 IPR017972 GO:0005506|GO:0016705
Dere11g0920 241 Coils Coil 53 83 - -
Dere11g0920 241 PRINTS P450 superfamily signature 171 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS P450 superfamily signature 180 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS P450 superfamily signature 40 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS P450 superfamily signature 94 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 SUPERFAMILY Cytochrome P450 6 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 Gene3D Cytochrome P450 1 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 93 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 49 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 134 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 29 46 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 180 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PRINTS E-class P450 group I signature 170 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 Pfam Cytochrome P450 8 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0920 241 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 236 - -
Dere11g0920 241 FunFam Geraniol 8-hydroxylase 2 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0920 Dere-ChrDere11 17540233 17546026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0920 8 236 Cytochrome P450 AT2G45550 54.585 2.18e-86 263