Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0902 ATGGCTTCAAATGTTCACAGAAATGGCACCCAAAGGGGGACCGCCAGGTTCGATCGGCAGGTTTCGGCGGGTACTAACTTCAAAACGGCGTCGTTAAAATCAAGGGTTCCTCCGTCCTCGCAGTCTCCGGGATCTGCTCTTCGCCGGAGCAGCCCGGCCTCTTTGGCAGCAAGAAATGGAGACGGAGTACCTGGTAGAGTTCGAGTGGCTGTAAGATTGAGACCTCGAAATGCTGAAGAAATGGCGGCAGATGCTGATTTTGCTGACTGTGTTGAATTGCAACCTGAGCTTAAGAGGTTGAAGCTTCGGAAAAACAATTGGGATTCAGACACATATGAGTTTGATGAAGTATTCACGGAATTTGCATCACAGAAGCGTGTCTATGAAGTTGTTGCTAAGCCAGTAGTGGAGAGTGTTCTTGATGGGTACAATGGGACAGTAATGGCTTATGGTCAAACAGGAACTGGAAAAACTTTTACCGTTGGACAATTGGGGGAAGATGACACCTCTAACCGCGGTATTATGGTTCGTTCCATGGAGGATATTTTAGCAGATCTATCTCCGGAAACTGATTCTGTCACTGTCTCGTATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCTGCTAATGATAACATTCCTATAGTGGAAGATCCAAGAACTGGTGATGTATCTTTGCCTGGGGCAACTGTTGTAGATATCAGGGACCAGCAGAGTTTCTTGGAGTTGCTAAGAGTCGGGGAAGCTCACCGTTTTGCTGCTAACACAAAGCTGAATACTGAATCTTCTCGCAGTCATGCTATTCTGATGGTGCATGTTAAGAGGTCTGTCATGGAAAATGAAGATATTACTTCTAATGAAAATGATGAGGTTTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGAAAGAGCAAGTTGGTTGTGGTAGATTTGGCAGGTTCAGAGCGTATCCATAAGTCAGGGAGTGAAGGACAGATGCTAGAGGAAGCCAAATCCATAAATCTTTCACTTAGTGCATTGGGAAAATGTATAAATGCTCTAGCAGAGAACAATGCTCATATTCCAATTCGTGATTCCAAGCTCACCAGGTTGCTTAGAGATTCCTTTGGAGGCACTGCTAGGACTTCTTTAATTGTAACTATTGGTCCATCTCCCCGTCATCGAGGAGAGACTGCAAGTACCATACTGTTTGGCCAGCGGGCTATGAAAGTGGAGAATATGTTGAAAATAAAGGAGGAGTTTGATTATAAAAGTCTGTCCCGGAGGCTTGAAGTACAAGTAGATAAGTTAATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGCAGAAGTTGAAAGAATAAATTTGGAGGCACAAAGTCATATTGCTGAGGTTGAGAGGAATTTTGCAGATGCATTAGAGAAAGAGAGGTTGAAACTCCAATTGGAGTACATGGATTCTGTAAAGCAGTTGGAGCATAAACTGGTGTTAAGTCAAGAAAGACATGACTGCAATGGCTTTGTGGATGATCATGGAGAGGGACCTGGGCCGTCATCTGCAGATGAAGTTGCTGAGGTCAAAAGGCTGCTTGAAAATGAAATCAATCAGAGAAAGGCAGCTGAAGAAGAGGTAGAATATCTAAAATGTCAGCTGGGGAAATATTCACAAACAGAGGCAGGAGGGGATGTGGAGATTCTAAATCTGCACAACATCCTGGAGGATGAGGCTCATCAGAAAAAGAAACTTGAAGAAGAAATAATCATTCTACGAAGTCAGCTAATACAATTGAATTATGAAGCTGACCAGATGAGAAGGTGTTTGGAAAGTGGTGTCTCTGGAAATGCATTTTCTGCCATGGATTCAGCCATGTCTCAAGTTAGGAATTCTCAACTGAGAGACACTGGGAATGGTCAGAAGGCATCTGTTGCTACACTTTTTGAACAAGTTGGGTTGCAAAAGATATTGACATTGCTGGAGTCAGATGATGCCAATGTACGGATTCATGCGGTGAAAGTGGTTGCCAACTTAGCAGCTGAAGAGGCAAATCAGAAAAGAATTGTAGAAGCCGGTGGTCTTACATCCTTGCTGATGCTTCTCAGACGATATGATGATGAAACTGTTCGCAGAGTGGCAGCAGGGGCAATAGCCAATCTTGCGATGAACGAAGCCAATCAGGAACTCATTATGGCTGAAGGTGGAATTACTCTGTTGTCAATGACTGCATCTGATGCCGAAGATCCACAAACTCTCCGAATGGTAGCCGGGGCTATTGCTAATCTATGTGGAAATGATAAGTTATTAATGAAGCTGAGATCTCAGGGAGGTATAAAGGCTTTACTGGGAATTGTAAGGTGTGGACATCCTGATGTTCTTTCCCAAGTTGCACGAGGCATAGCTAACTTTGCAAAATGCGAGTCCCGTGCTTCCAGTCAAGGGATAAAAAGTGGCAGATCCATTTTGGTAGAAGATGGCGCACTTCCATGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGCCACATCGAGCTTGCAATTTGCCACTTGGCACAGCATGAAGTGAATGCAAAAGACTTGATTAGTGGGGGTGTCCTTTGGGAGCTGGTCCGGATTTCAAGGGATTGTTCGCGAGAGGACATACGCAGTCTTGCCCGTCGGACTCTGAATTCTAGCCCCACATTCAAATCTGAATTGCGGCGATTACGAATAGAGTATTGA 2718 0.4422 MASNVHRNGTQRGTARFDRQVSAGTNFKTASLKSRVPPSSQSPGSALRRSSPASLAARNGDGVPGRVRVAVRLRPRNAEEMAADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVFTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGQLGEDDTSNRGIMVRSMEDILADLSPETDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATVVDIRDQQSFLELLRVGEAHRFAANTKLNTESSRSHAILMVHVKRSVMENEDITSNENDEVSHLTKPSKPLVRKSKLVVVDLAGSERIHKSGSEGQMLEEAKSINLSLSALGKCINALAENNAHIPIRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEVQVDKLIAENERQQKAFEAEVERINLEAQSHIAEVERNFADALEKERLKLQLEYMDSVKQLEHKLVLSQERHDCNGFVDDHGEGPGPSSADEVAEVKRLLENEINQRKAAEEEVEYLKCQLGKYSQTEAGGDVEILNLHNILEDEAHQKKKLEEEIIILRSQLIQLNYEADQMRRCLESGVSGNAFSAMDSAMSQVRNSQLRDTGNGQKASVATLFEQVGLQKILTLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYDDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKLLMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASSQGIKSGRSILVEDGALPWIVQNANNEAAPIRRHIELAICHLAQHEVNAKDLISGGVLWELVRISRDCSREDIRSLARRTLNSSPTFKSELRRLRIEY 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0902 905 CDD KISc 66 406 - -
Dere11g0902 905 ProSitePatterns Kinesin motor domain signature. 308 319 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere11g0902 905 Gene3D - 628 737 IPR011989 -
Dere11g0902 905 ProSiteProfiles Kinesin motor domain profile. 66 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 PANTHER CENTROMERE PROTEIN E 66 612 IPR027640 GO:0003777|GO:0007018
Dere11g0902 905 MobiDBLite consensus disorder prediction 1 49 - -
Dere11g0902 905 Pfam Armadillo/beta-catenin-like repeat 680 717 IPR000225 GO:0005515
Dere11g0902 905 Coils Coil 563 597 - -
Dere11g0902 905 Gene3D - 738 899 IPR011989 -
Dere11g0902 905 MobiDBLite consensus disorder prediction 1 61 - -
Dere11g0902 905 SMART kinesin_4 64 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 Pfam Kinesin motor domain 72 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 SUPERFAMILY ARM repeat 636 889 IPR016024 -
Dere11g0902 905 Coils Coil 424 455 - -
Dere11g0902 905 Coils Coil 521 548 - -
Dere11g0902 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 445 IPR027417 -
Dere11g0902 905 Gene3D Kinesin motor domain 61 438 IPR036961 -
Dere11g0902 905 FunFam Kinesin-like protein 617 893 - -
Dere11g0902 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 688 731 IPR000225 GO:0005515
Dere11g0902 905 FunFam Kinesin-like protein 58 438 - -
Dere11g0902 905 PRINTS Kinesin heavy chain signature 358 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 PRINTS Kinesin heavy chain signature 309 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g0902 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 647 689 IPR000225 GO:0005515
Dere11g0902 905 SMART arm_5 761 801 IPR000225 GO:0005515
Dere11g0902 905 SMART arm_5 719 760 IPR000225 GO:0005515
Dere11g0902 905 SMART arm_5 677 718 IPR000225 GO:0005515
Dere11g0902 905 SMART arm_5 637 676 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0902 Dere-ChrDere11 17083063 17102007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0902 61 410 Calmodulin-binding Proteins AT5G65930 35.083 1.65e-46 179