Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0897 ATGAGTGTAAACTGTAGCAGTAGTTGTGGAGCTGAAGGTAGTAGTAGTGGCGGTAGTGGTGGCGGGCCGTGTGGCGCGTGCAAGTTCTTGCGCCGGAAGTGCTTGCCGGGATGTATTTTCGCGCCGTACTTCGATTCCGACCAAGGGCCGGCGTACTTCGCGGCGGTGCACAAGGTTTTCGGGGCGAGCAACGTGTCAAAGCTGCTTCTGAGTGTGCCGGTGCACAAGAGGCTGGACGCAGTGATCACCATCTGCTACGAAGCTCAGGCTCGGGTGAGAGATCCTGTCTATGGCTGTGTTGCTCACATCTCTGCACTTCAACAACAGGTGGTGAGTTTGCAAGCTGAAGTCTCCTACTTACAAGGCCATCTTGCTATGTTGGAGTTGCCTCAACCGCCGGCGCCTCCCCCGCTGCAGTCACAAGCTTCAATGGCAATCTCACCGGCGTCTGCCTCAACCGCCACGTCTACATATAATCTTTCTTCACTTGTGGATCCCATGGCCCAAAACCCATATTGGGCCATACAGCAACGGCCCATGGGCGAACGTCAATGA 555 0.5568 MSVNCSSSCGAEGSSSGGSGGGPCGACKFLRRKCLPGCIFAPYFDSDQGPAYFAAVHKVFGASNVSKLLLSVPVHKRLDAVITICYEAQARVRDPVYGCVAHISALQQQVVSLQAEVSYLQGHLAMLELPQPPAPPPLQSQASMAISPASASTATSTYNLSSLVDPMAQNPYWAIQQRPMGERQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0897 184 MobiDBLite consensus disorder prediction 1 15 - -
Dere11g0897 184 PANTHER LOB DOMAIN CONTAINING PROTEIN 21 153 - -
Dere11g0897 184 MobiDBLite consensus disorder prediction 1 20 - -
Dere11g0897 184 Pfam Lateral organ boundaries (LOB) domain 23 120 IPR004883 -
Dere11g0897 184 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0897 Dere-ChrDere11 17016323 17020215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0897 26 178 AS2 family AT2G45420 66.463 5.54e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere11g0897 LOB 1.1e-37 No_clan