Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0881 ATGATCCCCACTTTTATTTTTATATCTCTTGTGGTTCTCTTTGATGTCACTTATGCTTGGCTCTTACCCGTTGTTACTGCTTCTGATGATCCATCTTCTATAAACAAAAAGGTGTCCAAGCTGGCCATTATTTCCTTCACAAGTGCATTTGTCATCACAAGTGTACTTGTCATTTCAATCGTAGCAGTCAATCAATGTCTCAGGTCATTGAGTTTTAGACTACATGTGGTTAAGAAAATCAAATACAAGGCAACGCAGGTGAATAAGAATGGAGACTTGTTCTCAATATGGAATTACGATGGTAAGATCGCATTTGAAGAGATCATTGAAGCAACCGAAGATTTTGATACAAAGTATTGCATTGGAACAGGTGGTTATGGTAGTGTTTACAGGGCACGGCTTCCTTGTGGCCGAATTGTTGCATTGAAGAAGTTTCATGAAATGGAATCTGAAAATCAGTCTTTTGTGAAGAGTTTCCGCAATGAGATCAAGATACTATCAGAGATTCGTCATCGAAACATTGTGAAGCTCTATGGCTTTTGCTTGCATAAGCGGCGCATGTTTCTGGTTTATGCTTTTATGGAAAGTGGCAGCCTATTACGCGTCTTGAGTAACGATGAAGAGGCTTATAAGCTAAATTGGAGCATGAGAGTCAATATTATTAAGGGAATAGCTCATGCTTTAGAATACATGCAACATGACTGTGTCCCACCAATTCTTCATCGAGATATAACAAGTAGCAACGTATTGTTGAACTCAGCTATGGAGGCGTTTGTCTCGGACTTCGGCACAGCTAGGCTCCTTGATTCTGATTCATCAAATCAAACTCTACCAACTGGTACTTGTGGATATATCGCTCCAGAATTTGCATACACTCTAACGGTGACGAAAAAATCTGACATATATAGCTTTGGAGTAGTGGCCTTAGAAACTATGATGGGAAAGCATCCTGGAGAGCTAATGTCGTGTTTGGCCAATCCCCATACTCAAAAAATAATGCTGGGAGATATCTTAGACACAAGGCTTCCTCAACCTCGGACTCGGAAAGATATTTGGGATGTGGTTCTTGTGGTAACACTTGCATTAGCATGTCTATGTCCCTCCCCGAATTCTAGGCCATCAATGAAGCAAGTGACTCAGAAACTTTCAGTTTCCAGGCCTCTGTTTTCAATGCCCCTCCATGATATTTCAATTTGTCAATTAATGAGTCAAGAAAATTTCTTGTAG 1227 0.4018 MIPTFIFISLVVLFDVTYAWLLPVVTASDDPSSINKKVSKLAIISFTSAFVITSVLVISIVAVNQCLRSLSFRLHVVKKIKYKATQVNKNGDLFSIWNYDGKIAFEEIIEATEDFDTKYCIGTGGYGSVYRARLPCGRIVALKKFHEMESENQSFVKSFRNEIKILSEIRHRNIVKLYGFCLHKRRMFLVYAFMESGSLLRVLSNDEEAYKLNWSMRVNIIKGIAHALEYMQHDCVPPILHRDITSSNVLLNSAMEAFVSDFGTARLLDSDSSNQTLPTGTCGYIAPEFAYTLTVTKKSDIYSFGVVALETMMGKHPGELMSCLANPHTQKIMLGDILDTRLPQPRTRKDIWDVVLVVTLALACLCPSPNSRPSMKQVTQKLSVSRPLFSMPLHDISICQLMSQENFL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0881 408 Gene3D Phosphorylase Kinase; domain 1 75 193 - -
Dere11g0881 408 SUPERFAMILY Protein kinase-like (PK-like) 96 382 IPR011009 -
Dere11g0881 408 ProSitePatterns Tyrosine protein kinases specific active-site signature. 239 251 IPR008266 GO:0004672|GO:0006468
Dere11g0881 408 Pfam Protein kinase domain 118 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0881 408 PANTHER LEUCINE RICH REPEAT KINASE 2 28 387 - -
Dere11g0881 408 FunFam MDIS1-interacting receptor like kinase 2 194 387 - -
Dere11g0881 408 Gene3D Transferase(Phosphotransferase) domain 1 194 388 - -
Dere11g0881 408 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Dere11g0881 408 FunFam Leucine-rich repeat receptor protein kinase MSP1 77 193 - -
Dere11g0881 408 ProSiteProfiles Protein kinase domain profile. 115 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0881 Dere-ChrDere11 16595843 16597450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0881 51 287 Receptor kinase-like Gene Family AT4G08850 49.793 1.95e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g0881 Pkinase 1.5e-43 CL0016