Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0880 ATGGAATGCGGTAGCCTATTACATGTCTTAAGTAATGATGAAGAAGCTCATAAGCTAAGTTGGAGCAAGAGAGTCAATATTGTTAAGAGAATAGCTCATCGAGATATAACAATTAGCAATGTTTTGTTGAACTCAGCTATGGGGGCTTTTGTCTCAGACTTTGGCACAGCAAGGCTCCTTGATCCTGATTCATCAAATCAAGCTCTACCAGTTGGTACTTGTGGATATGTTGCTCCAGATGCAAGACTCCCTCAACCTAGCACTCGGAAAGATATTCGGGATATGGTTCTTGTGGTAACACTTGCATTAGCATGTCTTTGTCCCTCCCCAAATTCTTGGCCATCGCTAAAGCAAGTCACTCAAACTTTCAATTTCCAGGCCTCTGTTTTCAATTGCCCTCCATGA 405 0.4222 MECGSLLHVLSNDEEAHKLSWSKRVNIVKRIAHRDITISNVLLNSAMGAFVSDFGTARLLDPDSSNQALPVGTCGYVAPDARLPQPSTRKDIRDMVLVVTLALACLCPSPNSWPSLKQVTQTFNFQASVFNCPP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0880 134 PANTHER LEUCINE RICH REPEAT KINASE 2 1 79 - -
Dere11g0880 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0880 134 SUPERFAMILY Protein kinase-like (PK-like) 1 125 IPR011009 -
Dere11g0880 134 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0880 Dere-ChrDere11 16591099 16592048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0880 1 79 Receptor kinase-like Gene Family AT4G08850 51.064 1.43e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g0880 None None None