Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0879 ATGCACAACTCTCAGAAAGTGCAGGATATCGAAACTGTTATCATAAGTGCATTTATCATTGCATGTATATCAGTCATTACAAATGTAGTAGTTTATCGATGTTGCAGGTCATTGAGACAACCAAAGGTTAAGAAAATCAAAGATGAGGCATTGCAGGTGAAGAACGGAGACTTGTTCTCAATATGGAACTATGATGGTAAAATCGCATTTGAAGATATCATTAAAGCAACTGAAGATTTTGATATGAAGTATTGCATTGGAACAGGTGGCTATGGTAGTGTTTACAAGGCACAACTTCCTAGTGGCAGAATTGTTGCATTGAAAAAACTTCACAAAATGGAATCAGAAAATCAGTCTTTTGACAAGAGTTTCCGCAATGAGATCAAGATATTATCTGAGATTCGTCATCGAAACATTGTGAAGCTCTATGGCTTTTGTTTGCATAAACGATGCATGTTTCTGGTTTATGCTTTCATGGAAAGTGGTAGCCTATTACATGTCTTAAGTAATGATGAAGAAGTTCATAAGCTAAGTTGGAGCAAGAGAGTCAATATTGTTAAAGGAATAGCTCATGCTTTAGCGTACATGCATCACGACTGTGTCCCACCGATTCTTCATCGAGATATAACAAGTAGCAATGTTTTGTTGAACTCAGCCATGGAAGCTTTCGTCTCGGACTTCGGCACAGCTAGGCTCCTTGATTTTGATTCATCAAATCAAACTCTACCAGTTGGTACTTATGGATATATTGCTCCAGAATTTGCCTACACGTTAACTGTGACAGAAAAATGTGATGTCTATAGCTTTGGAGTAGTCGCCTTAGAAACTATAATGGGAAAGCATCCTGGAGAGCTAATGTCATGTTTGGCCAATCCTCTTACTCAGAAAATAATGCTGAGAGATATCTTAGACGCCAGGCTCCCTCAACCTCGCACTCGCAAAGATACTTGGGATGTGGTTCTTGTAGTGACACTTGCATTAGCATGTCTTTGTCCCTCCCCAAATGCTAGGCCATCAATGAAGCAAGTGACTCAGAAACTTTCAGCTTCCAGCCCTCTTTTTTCAGTGCCCCTTCATGATATTTCGATTGGTCACTTAATTGGTCAAGAAATATATTTTTGTAGACAAGAATCAAGAGAAATATAA 1146 0.3874 MHNSQKVQDIETVIISAFIIACISVITNVVVYRCCRSLRQPKVKKIKDEALQVKNGDLFSIWNYDGKIAFEDIIKATEDFDMKYCIGTGGYGSVYKAQLPSGRIVALKKLHKMESENQSFDKSFRNEIKILSEIRHRNIVKLYGFCLHKRCMFLVYAFMESGSLLHVLSNDEEVHKLSWSKRVNIVKGIAHALAYMHHDCVPPILHRDITSSNVLLNSAMEAFVSDFGTARLLDFDSSNQTLPVGTYGYIAPEFAYTLTVTEKCDVYSFGVVALETIMGKHPGELMSCLANPLTQKIMLRDILDARLPQPRTRKDTWDVVLVVTLALACLCPSPNARPSMKQVTQKLSASSPLFSVPLHDISIGHLIGQEIYFCRQESREI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0879 381 ProSiteProfiles Protein kinase domain profile. 80 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0879 381 FunFam MDIS1-interacting receptor like kinase 2 159 352 - -
Dere11g0879 381 SUPERFAMILY Protein kinase-like (PK-like) 66 347 IPR011009 -
Dere11g0879 381 FunFam Leucine-rich repeat receptor protein kinase MSP1 43 158 - -
Dere11g0879 381 Gene3D Transferase(Phosphotransferase) domain 1 159 353 - -
Dere11g0879 381 Gene3D Phosphorylase Kinase; domain 1 41 158 - -
Dere11g0879 381 PANTHER LEUCINE RICH REPEAT KINASE 2 12 353 - -
Dere11g0879 381 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Dere11g0879 381 ProSitePatterns Tyrosine protein kinases specific active-site signature. 204 216 IPR008266 GO:0004672|GO:0006468
Dere11g0879 381 CDD STKc_IRAK 86 347 - -
Dere11g0879 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Dere11g0879 381 Pfam Protein kinase domain 85 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0879 Dere-ChrDere11 16582721 16584240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0879 4 252 Receptor kinase-like Gene Family AT4G08850 50.000 1.06e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g0879 Pkinase 7.8e-46 CL0016