Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0865 ATGGAAAGCGATGCTCGTGACAGCTTCTCTAGCACACCGTCTTCTTTTTCATCTTCGTCCTCTTCATCTTCATCCTCATCGACTTCAGCGATACCATCTTCTTCTTCGAGCTCCAAGCAAGACTCTCAGAGAAGCTCAAATGGCAAGCAACTATGCAAGAAGAAGAAGAAGCAGAGAAGCGAAGATAATGAAGGGAAGCATCCTACGTACAGAGGCGTGAGAAAGAGAAATTGGGGGAAATGGGTTTCTGAGATCCGCGAGCCGAGAAAGAAGTCGAGAATATGGCTCGGAACGTATCCGACTGCAGAAATGGCAGCCAGAGCGCATGATGTAGCCGCTTTAGCCATCAAAGGTCACTCGGCTTACCTCAATTTCCCCGAACTGGCTCACCGGCTCCCCCGTCCGGCCAGCGCGGCTCCAAAGGACATCCAAGTCGCGGCTGCAAAGGCCGCAGCCACCGTCCTCGACGAGGTTAAACATTGTGAAGCCGAGCCGAGCCAAGCCGAACAGGCTTCTTCCTCTTGGAGTTCTCTTGCTAATGAAGAAGACACTTTGTTTGACCTTCCAGATCTCTTCCCTGAAAGCAATAATGGAGTTTGCTCATATTCCTCTTGGCATTTATGTGCAGTTGATAGTGGTTTTAGACTTGATGATGATCCATTTTTGTGGGAGAATTACTAG 681 0.4934 MESDARDSFSSTPSSFSSSSSSSSSSSTSAIPSSSSSSKQDSQRSSNGKQLCKKKKKQRSEDNEGKHPTYRGVRKRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAHRLPRPASAAPKDIQVAAAKAAATVLDEVKHCEAEPSQAEQASSSWSSLANEEDTLFDLPDLFPESNNGVCSYSSWHLCAVDSGFRLDDDPFLWENY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0865 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 49 195 - -
Dere11g0865 226 MobiDBLite consensus disorder prediction 1 47 - -
Dere11g0865 226 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Dere11g0865 226 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 Pfam AP2 domain 68 119 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Dere11g0865 226 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Dere11g0865 226 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Dere11g0865 226 MobiDBLite consensus disorder prediction 1 72 - -
Dere11g0865 226 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0865 Dere-ChrDere11 16278023 16278703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0865 57 224 AP2-EREBP Transcription Factor Family AT2G44940 52.632 1.12e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere11g0865 AP2 7.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0865 11 16278023 16278703 Dere11g0865 11 16278023 16278703 ECH