Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0844 ATGGGGATATCAGGGAAAGTGGAATTGGAGTTAGAACGAAGTGAGGCTCTGGATGCTGAGCGAATATTGTTGTCAACATCCAAGCTGGGTACGCACTGGCTCATTTGTGGGAAGAAGAGAGTCTCAGAGACTCAGATCAGTGTTCAGTATTGTGTTGCTCAAATGGTGGAGAAGGAAAGAGTGTGGACGGAAGAGGAAGAGTTCTCAGCCGATGACTTTCCTTCCATTGGACTAGCAAATATGACGGCAACTGCATCGGAGATTGAGGAGTCAGGTGAGTACATTGTCACTGATGCTGCAGAACTTTACCTTAAGATCAGTTTAACGGAGTTGCAGGAAGATTATGAGATTATTAAATCTGACCCTGGGGTTTTTTTTTTTAGGGGCTATCCTCGAGAGATTCTGTCGTACTATATTGGTGCTGTTGCAAGTGTTGATCAGTTAGATTGTATCAATTGGTGTTGTTGCTATTGTATCTTTGTTTATCTTCTTGATGGTGAGTATCTTTATGACCAAGAAGTGTTGCTTAGACTTGTTGCCTCTGCCTTCACTAACTTCGTAGAATTGGTTGAGAAATCATGCAATGAAAAATGTAAGGAGCAATTGGAAATAACAAAAGCATATTACAAGCTGGAATTGAAACGCCATTTAGATAAAAATCCAGGCTTAGAGGAAGCTAAAGAGAAATCCCAACAATTGCAAAAAGTGATCGCAATTCTTGGGAATGACAAGAGACGACTAATTTATTATCAGAATGATTATGTTGATGATGCTGACCTTGCTAAGGAAGTTATTCAAAAATTTCACGAGTTCTTCAAAAGAATGTACAAGATGGTCACAGAAGCTGATATCAATGAGTTTAAAACAAATTATAGGAGATCTAACTCTCAGAAGAATGAGTTGATTGCGTTGTACAAGGAGAGCAAGGATATTCTTGATGAGGCTAAAGCTGTTAATTATGCTTTGGGCTCCATTTTGAAAGGTCCATCACCTAATAAATTTGAACCATTTATTAATGTTGCTTTGAATTTTATGCCTATTGTGAAAATGAAAGAAGATTTTGTCCCACTGCTGCTTGATTTTGAAAGTTGGACAACAATTCTATGTGGGAATATATTTTTCATGTTTTTGTTAAGGAAGAGATCAGCAAGTTTCGTTGAGGTAAGTATGATTCGAAAAACTAAATGGGCATTTTCAGAAAATGTGCAAGTGGAGATTGCAAGAACCGAGCACGTTTCCATAGAGTACAGATTTGAGCTTGTTTCTATCGAGGAGTGTTTGGCAAGGACATATTAG 1296 0.3827 MGISGKVELELERSEALDAERILLSTSKLGTHWLICGKKRVSETQISVQYCVAQMVEKERVWTEEEEFSADDFPSIGLANMTATASEIEESGEYIVTDAAELYLKISLTELQEDYEIIKSDPGVFFFRGYPREILSYYIGAVASVDQLDCINWCCCYCIFVYLLDGEYLYDQEVLLRLVASAFTNFVELVEKSCNEKCKEQLEITKAYYKLELKRHLDKNPGLEEAKEKSQQLQKVIAILGNDKRRLIYYQNDYVDDADLAKEVIQKFHEFFKRMYKMVTEADINEFKTNYRRSNSQKNELIALYKESKDILDEAKAVNYALGSILKGPSPNKFEPFINVALNFMPIVKMKEDFVPLLLDFESWTTILCGNIFFMFLLRKRSASFVEVSMIRKTKWAFSENVQVEIARTEHVSIEYRFELVSIEECLARTY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0844 431 SUPERFAMILY Chaperone J-domain 202 252 IPR036869 -
Dere11g0844 431 CDD DnaJ 203 242 IPR001623 -
Dere11g0844 431 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 185 309 IPR042977 -
Dere11g0844 431 Gene3D DnaJ domain 190 268 IPR036869 -
Dere11g0844 431 Pfam DnaJ domain 200 249 IPR001623 -
Dere11g0844 431 Coils Coil 223 243 - -
Dere11g0844 431 ProSiteProfiles dnaJ domain profile. 185 253 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0844 Dere-ChrDere11 15790394 15794449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0844 70 126 Eukaryotic Initiation Factors Gene Family AT1G56070 44.776 2.33e-06 48.1