Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0840 ATGGCTCTATTCACTCTTCAACATTCACTCTCTCATTTCTTCACACTTTCCGCTTTCTTCTCATTCTTAATAGTGAACAGCACTTCCTCTTGCTCCCTCCCTAGAAAGTTTCTTAATGCTTCTGCTTCATACTCCTCTACTTCAGATTGGACTCCTGCTGATGCTACGTGGTATGGAAGCCCCTCCGGCGCCGGAACTGATGGGGGTGCTTGTGGATATGGAAGTGCTGTGGGGCAACCTCCATTTTCTTCAATGATATCAGCAGGCGGCCCACCTTTGTTTGACTCAGGCAAAGGATGTGGTGCTTGTTATGAGGTGAAGTGCACAGGGCATCCGGAATGTTCAGGAAACCCAGTGAGCGTAGTGATCACTGATGAGTGTCCTGAGTGTGGGTCTTCCCAGAGATTTCACTTTGATTTGAGTGGCACAGCTTTTGGTGCCATGGCTGTTTCTGGTCAGGCCGATAAGTTACGCAATGTTGGCAGACTTGAGATTCAGTATAGAAGAGTGGAGTGTAGCTATCCAGGAGTATCAATAACATTTAAAGTGGACTCTGGATCCAATCCATACTATTTTGCTGTGGTGATAGAATATGAGAATGGAGATGGTACCCTTGACAGTGTTGAACTCAAGGAAGCTCAGGACTCAGCTTCATGGCGTGCCATGCAACATTCCTGGGGTGCGGTCTGGAAGCTCGACTCTGGCGGCACGCCTCTTCAGGCTCCGTTCTCGATCCGACTAACCTCGCCGGCATCCAACAAGAACGTTGTGGCCAACAATGTGATTCCGGCAGGGTGGAGTCCTGGTCAGACTTACCGATCTGCCGTCAACTTTGAATAA 840 0.4893 MALFTLQHSLSHFFTLSAFFSFLIVNSTSSCSLPRKFLNASASYSSTSDWTPADATWYGSPSGAGTDGGACGYGSAVGQPPFSSMISAGGPPLFDSGKGCGACYEVKCTGHPECSGNPVSVVITDECPECGSSQRFHFDLSGTAFGAMAVSGQADKLRNVGRLEIQYRRVECSYPGVSITFKVDSGSNPYYFAVVIEYENGDGTLDSVELKEAQDSASWRAMQHSWGAVWKLDSGGTPLQAPFSIRLTSPASNKNVVANNVIPAGWSPGQTYRSAVNFE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0840 279 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 68 177 IPR007112 -
Dere11g0840 279 Pfam Expansin C-terminal domain 179 263 IPR007117 -
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 181 196 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 88 99 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 197 212 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 108 118 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 149 164 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 PRINTS Major pollen allergen Lol pI signature 250 267 IPR005795 GO:0005576|GO:0019953
Dere11g0840 279 Gene3D - 174 279 IPR036749 -
Dere11g0840 279 SMART dpbb_1 86 167 IPR007112 -
Dere11g0840 279 CDD DPBB_EXPB_N 50 172 - -
Dere11g0840 279 SUPERFAMILY Barwin-like endoglucanases 41 176 IPR036908 -
Dere11g0840 279 PANTHER EXPANSIN-B3 33 278 - -
Dere11g0840 279 SUPERFAMILY PHL pollen allergen 179 274 IPR036749 -
Dere11g0840 279 Gene3D - 35 173 IPR036908 -
Dere11g0840 279 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 190 274 IPR007117 -
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 160 176 IPR007118 GO:0005576
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 90 108 IPR007118 GO:0005576
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 260 274 IPR007118 GO:0005576
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 49 64 IPR007118 GO:0005576
Dere11g0840 279 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
Dere11g0840 279 Pfam Lytic transglycolase 87 159 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0840 Dere-ChrDere11 15715320 15717165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0840 31 278 Expansin Gene Family AT1G65680 62.903 7.74e-113 324