Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0833 ATGCTCCGTTCGACTCCATCAACAAAGCCTGGGGAAGTAGCATGTGGCAAGAAGAACGACCTCGATTATCTCTTCCATCTCTATGAGCCATGCCGCGAGTTCTTGATCCAAGCACGAACATACCACATTGGTGGAGATGAAGACAGGGAACGAAAAGCATTGATGGAGTCGAAGCTAGGAACAAGACACGTCGACGGACTCTACACCAAGGAACAGATTGTGTTGCCATATTCAAATGCCAAGGAACATGTCGCAACAATAGAGACTCAGGTGCGGATGTGA 282 0.4823 MLRSTPSTKPGEVACGKKNDLDYLFHLYEPCREFLIQARTYHIGGDEDRERKALMESKLGTRHVDGLYTKEQIVLPYSNAKEHVATIETQVRM 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0833 93 Gene3D Protein LEAFY 3 62 IPR038276 -
Dere11g0833 93 PANTHER PROTEIN LEAFY 8 40 IPR002910 GO:0003677|GO:0006355
Dere11g0833 93 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 8 40 IPR035209 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0833 Dere-ChrDere11 15670718 15671096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0833 8 40 Orphan Transcription Factor Family AT5G61850 78.788 2.25e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Dere11g0833 C_LFY_FLO 2e-12 CL0123