Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0828 ATGTGCTTCACTTCATATTTGAATGCTTATCCCCAGATTGGGCAGTCTCGATACAGAGGTGGAGGTGGCAGGGGTAGTAGACCATTTAGACGAGGTGGTCGAGCCTATTTCAATCATCGAGGTCGAGCCCCTTACCGTGGTAGAGGACGTGGCCATGGTGGTGGTAGGCACTTGCCATCTCATTCTTCTGGAGCAGCCAATTCTTATGTAGAATTTGCACCATCTGCTGCTGAAGCCACTTCAGTCGCACAACCTTCATCAGTATCTGGGCCTATATCAATACCTCTACCAGCACAGGTTCCAACCGCACCATTGCAGCCACCACCACGTAAAGCATGGTGTGAAATTTGTAAGGTTGAGTGTAATACTCCTGAAATTTTGGAGCAGCATAAGAATGGCAAGCGACATAAGAAGAATTTGCAAGTACATGAGGAATTACAGAGGCGCAAAGCTCTAAATGGACAACAGTGTAGCCCGATGCCCACTTCTCAATTGAATTTAACTGTTCAGGCTGAGAAATTTCCGGAATTGAAGACAGAAGAATGCCCTGTAGAAAATCTGGGCTTTGATGCTACTGATGACAATGCCAAGGATGAAGCTGAGTTGCAAAATAAAACAGGAGAGACTTCTGAGGTTCCATCTGATGAACCCGAGGGAAGCCTCAGGGATGGTTTCGCTGCACGGGGCCGTGGTTTCAAGCGTAAGGTAAGAGGAGGTAGAGGAGGTAAATACGCGAGGTCTAATGATGGGTCAAGAAAGCCAGTGGAACCTCCAAAACCTAAAGAGACTGTATCTTTCATATGTGAGTTGTGCAATGTTAAATGTGAGTCACAGGTTGTTTATGACAGTCATTTGAGAGGTAAAAAGCACCTATCAAGTCTCAAGCGCGTCCATGGCCACCAAGCTTCATACCAAGGACCCGGACTGCAAGCACCTCCCTCTACTGACATCAGTGCGGTGTCTAATTCAATTGACATCAGTGCTCTGTCAAATTCAATTAACTCTCAAATCCAACAAGGTGTCAATGATCCACAGGTACTTTTGGCTCAGCTCCTAGTGACAGTATTGTCTCAAACCCAAGCGTCAGCAGTAGCAGCACCATCAGGATCTGTAGCTGCTCAGCATTTAGCACCCGCACTGGCGGCTGGATCAAGTTATGAACCACCGTTTCAAAATGTCTCACAGAAACAAGTGGCGGAAACCACTCCATGTGGTGGAAATGAGAATCCTACTGGGGAAACAAAAGATCAGGTGCTATCCACCCCTTCGAAGGTTGATGCTCCTCAAACTGTAGGTGGAAGCTCTGAAACTGAAGAGAAGGTGCCAAAACTTCCACAGAATAGCTCAGTTCTGACACCAGCAGAAGATTCAAGTGCAGCAAATGAGCAAGGTTCTTCAGAAGGGAAAACGCCCACTTCGTAG 1422 0.4691 MCFTSYLNAYPQIGQSRYRGGGGRGSRPFRRGGRAYFNHRGRAPYRGRGRGHGGGRHLPSHSSGAANSYVEFAPSAAEATSVAQPSSVSGPISIPLPAQVPTAPLQPPPRKAWCEICKVECNTPEILEQHKNGKRHKKNLQVHEELQRRKALNGQQCSPMPTSQLNLTVQAEKFPELKTEECPVENLGFDATDDNAKDEAELQNKTGETSEVPSDEPEGSLRDGFAARGRGFKRKVRGGRGGKYARSNDGSRKPVEPPKPKETVSFICELCNVKCESQVVYDSHLRGKKHLSSLKRVHGHQASYQGPGLQAPPSTDISAVSNSIDISALSNSINSQIQQGVNDPQVLLAQLLVTVLSQTQASAVAAPSGSVAAQHLAPALAAGSSYEPPFQNVSQKQVAETTPCGGNENPTGETKDQVLSTPSKVDAPQTVGGSSETEEKVPKLPQNSSVLTPAEDSSAANEQGSSEGKTPTS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0828 473 Gene3D Classic Zinc Finger 248 296 - -
Dere11g0828 473 Gene3D Classic Zinc Finger 104 145 - -
Dere11g0828 473 SUPERFAMILY beta-beta-alpha zinc fingers 105 143 IPR036236 -
Dere11g0828 473 SMART ZnF_U1_5 263 297 IPR003604 GO:0003676|GO:0008270
Dere11g0828 473 SMART ZnF_U1_5 109 143 IPR003604 GO:0003676|GO:0008270
Dere11g0828 473 MobiDBLite consensus disorder prediction 186 260 - -
Dere11g0828 473 MobiDBLite consensus disorder prediction 296 315 - -
Dere11g0828 473 MobiDBLite consensus disorder prediction 191 230 - -
Dere11g0828 473 MobiDBLite consensus disorder prediction 388 473 - -
Dere11g0828 473 SUPERFAMILY beta-beta-alpha zinc fingers 260 297 IPR036236 -
Dere11g0828 473 MobiDBLite consensus disorder prediction 14 65 - -
Dere11g0828 473 Pfam Zinc-finger of C2H2 type 113 136 - -
Dere11g0828 473 Pfam Zinc-finger of C2H2 type 266 290 - -
Dere11g0828 473 PANTHER OS06G0651300 PROTEIN-RELATED 45 341 - -
Dere11g0828 473 MobiDBLite consensus disorder prediction 33 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0828 Dere-ChrDere11 15572426 15573847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0828 266 294 C2H2 Transcription Factor Family AT5G61190 62.069 3.58e-07 50.8