Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0827 ATGGGTTATCAGCTTTCCATTCCAGGCTTCAGGCTTGTCCTCGATTCTCCTTCTCCAATATGCACGCAGCAACTGCGACCTCCACCACTCCAGAATCCGTTCCTGTGTTGGAAACTGCGTGCTTCTCTATATGCATCAAGCTCTCCTTCTCTAAAACAATATTCAACCCACAATGGAATAAAGGCTATAACTGTAGATGAACTTCCTCCTAACGCCCTTCGCCGCAAGGGAGACTCACAATGGAGAGGAGGCTTCAGTCTTGGACTCGACTTAGGAATGGCTCGTACAGGCGTTGCTCTCAGTAAAGGCTTCTCTATACGTCCTTTAACGGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTTCAGCTTCTAAAGATTGCTGAACAAGAGGAAGTTGATGAGTTTATAGTTGGACTTCCTAAATCTTCTGATGGGAAGGAAACACCACAGTCTAACAAAGTTCGCAGCATCGCTGGAAGGCTTGCAATTCGAGCTGCTGAGAGGGGTTTGAGAGTGTATCTACAGGATGAACATGGGACAACAACAGAAGCAATAGATCGAATGATTAATATGGGCCTCAGTAAGTCCTCTCAGCAAAGGAAACTTGATGCATATGCTGCCATGATGGTACTGGAGAGATATTTCTGCATGTCAGGTCAGGGTGTTGAACTTGTATTGCCCAAGAAACTTGATCTACAAGAAAAACTTCAGAAGGGTCCTCCCAAAGACGTTGATTTCTTCTCAGATGAATTTGAGGGCTGA 762 0.4554 MGYQLSIPGFRLVLDSPSPICTQQLRPPPLQNPFLCWKLRASLYASSSPSLKQYSTHNGIKAITVDELPPNALRRKGDSQWRGGFSLGLDLGMARTGVALSKGFSIRPLTVLELRGQKLEVQLLKIAEQEEVDEFIVGLPKSSDGKETPQSNKVRSIAGRLAIRAAERGLRVYLQDEHGTTTEAIDRMINMGLSKSSQQRKLDAYAAMMVLERYFCMSGQGVELVLPKKLDLQEKLQKGPPKDVDFFSDEFEG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0827 253 Pfam Holliday junction resolvase 86 215 IPR005227 GO:0006364
Dere11g0827 253 SUPERFAMILY Ribonuclease H-like 85 215 IPR012337 -
Dere11g0827 253 FunFam Holliday junction resolvase 86 223 - -
Dere11g0827 253 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 67 235 IPR005227 GO:0006364
Dere11g0827 253 SMART rnase_8s 84 184 IPR006641 GO:0006139
Dere11g0827 253 NCBIfam Holliday junction resolvase RuvX 87 215 IPR005227 GO:0006364
Dere11g0827 253 Gene3D - 86 222 IPR037027 GO:0006139
Dere11g0827 253 CDD YqgF 87 215 IPR005227 GO:0006364
Dere11g0827 253 Hamap Putative pre-16S rRNA nuclease [yqgF]. 84 219 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0827 Dere-ChrDere11 15568370 15571175 Proximal