Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0825 ATGCTTCACAGTGCATCAGTGTTTACATCACAGGCCTTGAAAGCAAGTACCAATGATTTCAGTCAGAACAACCTCATTGGATTGACACAGTTTGGAAGATTGTTCAGAGGTAAGTTTGAAGGTCGATGTGTGTCAGTGAAGATATGGGAAGAAGAAACGTTGAAACGCATAAGTTCCAAATACAATGAAGAGTATTCGATCATCAATGAGGAGGTTAAGTTTTGGATGAATCCAACAATAAAAGGTCATCCCAACTTGGTGGAATTAATTGGTTATTGTTGGGAGAAAGATGTGAAGGGCTTTGTTTATGATCTCAATCCTCTGGATACTTTGCACAATCTAATAGAGAAAGATGACCTAAATTGGGTTCAGAGAATTAATGTAATTCATGAAATTGCCAAGCTCTTGGAGTTCATTCATGGCCAAGGGAAGCAAAACATGATCTTCAACATCAGTGCTTCTCATATATTGCTAGACAAGGATTACAAGCCAAAATTATTTGATCCAATGTTGCCTAGCCAAGTGAAAATGCTTAAGGAGCAATTACCAATGTCATCTGGCTATGTTGATCCTTATTTCTCTCTTAGGGGTGGTGAATGGGGTAGGAGCAGTGAAGTGTTTTCATTTGGCATAATTATGCTAGAATTAATAACCAGAAGAATTTCCAACATGGGAAGGAAGGAAGATGATACTGATAGCCTTAATATGGATGGCCTACTACATGTTTGGGCCAAGAAAGAGTACAAGCCCAATTGTTCTCTGGTCCACAAAAATTTGCTGGAAGATTGGGGTTACTCTGCCCAAGACGGTGTTGCAGTAACTAGGCTTGCCTTGCAGTGCATAGATTTCTTTCCACTCAACCGTCCTACAATGAGGGAGGTCTTGCAAGGCCTAGAGAATCTTCTACTTTTACAACGTTTATGTGATGCCAGACCAACCAAAAAGGAAAAATACGAGGAGGTTGGTTCTGACTTCTTAGGCTGTGAATTAAGCCATAAGTCGGAGGGTAAGTTTGTTGAAAATGAAAGGCCTATGGACTATGTTGTGGAGTTTCCTCCAGAGGACGACAAGGGTGAGCTGGATATGGCCTTGGTCATTAATTCTGTTATGAAGGTGAAGGTGGATAAGATGTTAGGTTTAGGGAAGGATTTTAGTGTTCGAAGGACAAGAGTTGTTGGCAGGAAATCTCCTAGATATAAAGGAAAAACAGGAGCTCCGAATGATAGACTGGAGTTCAAGGCTACTGCTATTGATAACGCTGAGGGGCTGGGTAACTTGCCTTTAAAGGTCATTGGGTCATCATGA 1305 0.4084 MLHSASVFTSQALKASTNDFSQNNLIGLTQFGRLFRGKFEGRCVSVKIWEEETLKRISSKYNEEYSIINEEVKFWMNPTIKGHPNLVELIGYCWEKDVKGFVYDLNPLDTLHNLIEKDDLNWVQRINVIHEIAKLLEFIHGQGKQNMIFNISASHILLDKDYKPKLFDPMLPSQVKMLKEQLPMSSGYVDPYFSLRGGEWGRSSEVFSFGIIMLELITRRISNMGRKEDDTDSLNMDGLLHVWAKKEYKPNCSLVHKNLLEDWGYSAQDGVAVTRLALQCIDFFPLNRPTMREVLQGLENLLLLQRLCDARPTKKEKYEEVGSDFLGCELSHKSEGKFVENERPMDYVVEFPPEDDKGELDMALVINSVMKVKVDKMLGLGKDFSVRRTRVVGRKSPRYKGKTGAPNDRLEFKATAIDNAEGLGNLPLKVIGSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0825 434 SUPERFAMILY Protein kinase-like (PK-like) 5 298 IPR011009 -
Dere11g0825 434 Gene3D Phosphorylase Kinase; domain 1 1 105 - -
Dere11g0825 434 Gene3D Transferase(Phosphotransferase) domain 1 108 319 - -
Dere11g0825 434 ProSiteProfiles Protein kinase domain profile. 20 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0825 434 Pfam Protein kinase domain 22 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0825 434 PANTHER OS01G0588500 PROTEIN-RELATED 6 300 - -
Dere11g0825 434 SMART serkin_6 20 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0825 Dere-ChrDere11 15551178 15556375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0825 4 332 Strubbelig Receptor Gene Family AT4G22130 30.058 2.03e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0825 Pkinase 2.5e-13 CL0016