Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0822 ATGGTTAAGCACAATAATGTCATCCCTAGTAGCCATTTCCGAAAGCATTGGCAGAATTATGTGAAGACTTGGTTCAATCAGCCAGCACGGAAGAGCAGAAGACGATTAGCTCGGCAAAAGAAAGCTGTTAAGATTTTCCCTAGGCCTACAGCTGGACCTCTTAGACCTATCGTTCATGGTCAAACTTTGAAATACAACATGAAAGTTAGAGCTGGCAGAGGATTTTCTCTTGAAGAACTAAAGGCTGCTGGTATTCCCAAAAAGCTTGCTCCAACCATTGGCATTGCTGTAGATCATCGACGCAGGAACCGATCTTTGGAAAGTCTCCAAGCTAACGTCCAGAGGTTGAAGACATACAAGGCCAAGCTGGTTGTGTTCCCAAGACGTGCAGGCAAGATCAAGGCTGGTGATTCTACATCTGAGGAACTTGCAAATGCTACACAAGTTCAGGGTCCATACTTGCCCATTATGAGGGAGAAGCCATCTGTGGAGCTTGTTAAGGTTACGGATGATATGAAGGCATTCAAGGCTTATAACAAGCTTCGGCTTGAACGTACCAACCAACGTCACGTTGGTGCCAGGTTGAAGAGGGCTGCTGAAGCAGAAAAGGATGAAAAGAAGTGA 624 0.4551 MVKHNNVIPSSHFRKHWQNYVKTWFNQPARKSRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAGKIKAGDSTSEELANATQVQGPYLPIMREKPSVELVKVTDDMKAFKAYNKLRLERTNQRHVGARLKRAAEAEKDEKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0822 207 Gene3D - 167 207 - -
Dere11g0822 207 FunFam 60S ribosomal protein L13 166 207 - -
Dere11g0822 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere11g0822 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 206 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere11g0822 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Dere11g0822 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0822 Dere-ChrDere11 15471117 15472542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0822 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 83.246 5.10e-123 345