Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0821 ATGCCAGAAAGCGATAGGTCTGGTTCCGAATCCGAAGATGCCAGTGAGAATTCAAGCTCGGAGGAGGCAGAAAATGCCATCCATGGCCAACCCCAAGGCGTATCGGAGTACGAGAAACAAAGGCTCTCAAGAATTGCGGAGAACAGATCAAGGTTGGAGGCTCTAGGGTTGCTCAAAATCTCGTCCTCTTTGAAGGGTCCGCAACGCAAGGTTAGGGATCAGAAGGGGAAAAAGAAGGTTGGAGACGATGAAGAATACTTGCCTAATGAGGCAGAAGCGATACTAAGTTGTTCGAGTGGTGAAGATGGGCATGAGGATGATGAAGATGATGAGGATTTCGTTAGTGGAAAAGCTTGCCGGTCACGCAAAAGGAAGGTGAAGAATAAATATTTAAAGCCAAAAGCCAGAGTTTCTAGGCAGGAGCCTCACAATAATTCAAATCATATTGATGATGATAAAGCTTTGAAGCAGGCAATTGCTCTTTCACTACAAGACTCTGCAGATGGTTCATATTTTTCTGATAAGAATGTAGTGAATACCACTCATGTAGATATAAAGGGAAACAATCATATCCAAGAAGATAAGGGTAGAAGGAAGAACAAAAAATCGTTCATTAGTCGGCTGCAAATGACTGAGGATGATGTCATTGTACATTTCTTCCAGATTGATGAAACAGGTAAAGGAAGTGTAACAATGAAGGATTTACAAAGAGTTGCTACAGCTCATGATTTTACATGGACAGACAAGGAGTTATCTGATATGATCCGCTACTTTGATAATGATGGAGATGGAAAGCTAAGCCTTGATGATTTCCGGAAGATTGTTGTTCGCTGCAACATGATCAAAGGGTCAGAAAATTCTTGA 864 0.419 MPESDRSGSESEDASENSSSEEAENAIHGQPQGVSEYEKQRLSRIAENRSRLEALGLLKISSSLKGPQRKVRDQKGKKKVGDDEEYLPNEAEAILSCSSGEDGHEDDEDDEDFVSGKACRSRKRKVKNKYLKPKARVSRQEPHNNSNHIDDDKALKQAIALSLQDSADGSYFSDKNVVNTTHVDIKGNNHIQEDKGRRKNKKSFISRLQMTEDDVIVHFFQIDETGKGSVTMKDLQRVATAHDFTWTDKELSDMIRYFDNDGDGKLSLDDFRKIVVRCNMIKGSENS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0821 287 MobiDBLite consensus disorder prediction 1 42 - -
Dere11g0821 287 CDD EFh 222 275 IPR002048 GO:0005509
Dere11g0821 287 ProSitePatterns EF-hand calcium-binding domain. 259 271 IPR018247 -
Dere11g0821 287 SMART efh_1 250 278 IPR002048 GO:0005509
Dere11g0821 287 MobiDBLite consensus disorder prediction 60 152 - -
Dere11g0821 287 Gene3D - 176 286 - -
Dere11g0821 287 ProSiteProfiles EF-hand calcium-binding domain profile. 246 281 IPR002048 GO:0005509
Dere11g0821 287 MobiDBLite consensus disorder prediction 134 152 - -
Dere11g0821 287 Pfam EF-hand domain pair 218 275 IPR002048 GO:0005509
Dere11g0821 287 SUPERFAMILY EF-hand 202 278 IPR011992 -
Dere11g0821 287 MobiDBLite consensus disorder prediction 66 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0821 34 284 EF-hand Containing Proteins AT1G73440 41.897 7.14e-50 164