Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0819 ATGAAGGCTGTGCCCCTACCCTTTGAGGAATTTCGAGGGAAGGGGGTTTTGGATTTTGGCTCTGCTGCTTCAGATTCATTCTCGCAGCAGCAGAAGTGGAATCATAGTCACAACAATATCCACCAAGAGCATTGCTATGTGGGCACTGAGCCCACCTCCGTTTTGAACGTCAGAAGAAACCCAAGCCCTCCCACCTCCTCCTCCACACTGTCTTCCTCACACGGCGGTGGCGGCAGCTGCAGCGGCGGCACGGGCTCCACCGATAGCTCTACCGGCGCAGCAGCGGCGGCGAAGGTCTCAGGCGAGAACCCACCACCTCACACGGCGTTAGACGCTGCCCCGGCGCCGCCGGAAAGATGTGGGATGGGAATGGAGGACTGGGAGAGCGTCTTGTCTGAGTCGCCTGGTCAAGATCAGTCCATCCTGAGGTTGATTATGGGTGACATTGAAGACCCATCTGTGGGATTGAGCAGGCTCTTGCAGAGCGGGAGTGTTTCTCACCAAGATGTTGATTTCAATGGAGGAGGAGGAGGGGGTTTTGGTATGATGGATCAAAGCTCTGTCCTTGACCATATTTCTAGTGCAAATTTCGCAAGCAGCATTGACCCTTCTGGACCTCCTCCTGGGAATTGCTCTGATTTCCCTTTCAATACTCCCCACAACGTTAGCTTCAATGGTAATATTCCAAGAGTTGGTTCATCTGTGAATCCAAACCCCATTTTCCCTCCTTCACAAGCTTCGATCTCTCCTGCTATGTTTCAGCCTCAACACCACCAGCAATCTATTGAGTCGCTTGACGAGAAGCCTCAAATCCTCAATCCCCAGTTTATTTTGAACCAAAATCAGCCTCAGCTTATGCATAACCCAGCTTTGATTATGCCTTTGTCATATGAGCATCAGCTTCTCGCTCAGCCTCCGGCGAAACGGCTTCATTGTGGCTCCGTCAGACCTAATTCCCAGGTTCTAAAGGCTCCATTTCTAGATCCCGGACAGGAGCTGTATCTCCGGCGGGGGCAGCAACCGCCGCTTCAGTTGCTCCCTCACCACCTGCAGCAACGGCAGCCGCCAGCGGTTGTGGCTCCGAAGCAGAAAATGGCGACTCCTGGCGAAGAATTAGTGACCCACCAGCTTCAGCAGAGTGTGATGGACAAGCTGTTCAAGGCCACAGAGATGATCGAAACCGGTAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCGATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTACACGAGGGAGGCCTTGCAATCGCTGCTTCACCATTCAAACACCAACAGCAATTCTCTGACCTTCTCTCCCAGTGGCCTTATCCTCAAGATTGGGGCTTACAAATCGTTCTCAGAAATCTCCCCAGTTCTCCAGTTCTCCAATTTCACTGGCAACCAAGCACTGCTTGAAGCCGTTGAAGGGTTTGATCGAATTCATATAATGGATTTCGATATTGGGTTTGGTGGACAGTGGGCATCTTTCATGCAAGAGCTAGCTCTCAGGAATGGTGGTTCACCTTCTCTCAAAATCACTGCCTTTGTATCACCCTCCAATCACGACGAAATCGAGCTTAGTTTCACCCAAGAAATTCTGAAGCAATATGCTTCTGATATTAACATACCCTTCGAGCTCGAGATTTTAAGCCTCGAGTTATTGAACTCTGCTTCTTGGCCACATCCTCTTCGTGACTGCGAAGCCATTGCTGTTAATTTGCCCATTGCTTCATTTTCACACTGCCCATCATATCTTCCTCTGGTTCTTCGCTTTGTGAAGCAGCTCATGCCTAAGATCATCGTCACTGTGGATAGACCTTGTGATCGAACTGATGCACCATTTCCCCAGCATCTGATTTATGCTCTTCAATCTTATTCTGTGCTTCTCGAGTCGCTTGATGCTGTTAGCGTGAACCTTGATGTTCTTCAGATGATTGAGAAGTATCTTGTTCAACCGGCTATGGAGAAGCTCGTGTTGGGTCGCCATCGGATGCAGGAAAGAACACCGCAGTGGAAAACCCTGCTTCTGACATCTGGGTTCTCGCCATTGACGCTTAGTAACTTCACAGAGTCTCAAGCAGAGTGTTTGGTGCAGAGGAATCCTGGTAGGGGATTCCATGTGGAGAAGAAGCAGTCGTCTCTTGTTCTATGTTGGCAGAGGAAGGAACTAATCTCAGTTTCAACATGGGGATGCTGA 2220 0.5014 MKAVPLPFEEFRGKGVLDFGSAASDSFSQQQKWNHSHNNIHQEHCYVGTEPTSVLNVRRNPSPPTSSSTLSSSHGGGGSCSGGTGSTDSSTGAAAAAKVSGENPPPHTALDAAPAPPERCGMGMEDWESVLSESPGQDQSILRLIMGDIEDPSVGLSRLLQSGSVSHQDVDFNGGGGGGFGMMDQSSVLDHISSANFASSIDPSGPPPGNCSDFPFNTPHNVSFNGNIPRVGSSVNPNPIFPPSQASISPAMFQPQHHQQSIESLDEKPQILNPQFILNQNQPQLMHNPALIMPLSYEHQLLAQPPAKRLHCGSVRPNSQVLKAPFLDPGQELYLRRGQQPPLQLLPHHLQQRQPPAVVAPKQKMATPGEELVTHQLQQSVMDKLFKATEMIETGNPELAQGILARLNHQLSPIGKPFQRAAFYTREALQSLLHHSNTNSNSLTFSPSGLILKIGAYKSFSEISPVLQFSNFTGNQALLEAVEGFDRIHIMDFDIGFGGQWASFMQELALRNGGSPSLKITAFVSPSNHDEIELSFTQEILKQYASDINIPFELEILSLELLNSASWPHPLRDCEAIAVNLPIASFSHCPSYLPLVLRFVKQLMPKIIVTVDRPCDRTDAPFPQHLIYALQSYSVLLESLDAVSVNLDVLQMIEKYLVQPAMEKLVLGRHRMQERTPQWKTLLLTSGFSPLTLSNFTESQAECLVQRNPGRGFHVEKKQSSLVLCWQRKELISVSTWGC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0819 739 MobiDBLite consensus disorder prediction 54 96 - -
Dere11g0819 739 ProSiteProfiles GRAS family profile. 372 738 IPR005202 -
Dere11g0819 739 MobiDBLite consensus disorder prediction 54 123 - -
Dere11g0819 739 Pfam GRAS domain family 383 737 IPR005202 -
Dere11g0819 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 342 734 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0819 Dere-ChrDere11 15356961 15359180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0819 381 739 GRAS Transcription Factor Family AT4G00150 61.602 3.10e-145 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere11g0819 GRAS 3.1e-91 CL0063