Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0807 ATGTCCGCCTCATCCACTGCTTCCTTTTCACCGGACCAGCACGTCCTCTCTCCCTCCGACCAGCTCTGTTATGTCCATTGCAACTTCTGCGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTCACTGTACGATGTGGCCATTGCACCAACCTTCTCTCTGTCAACATGCGTGGCCTGCTTCTTCCTTCTGCCAATCAGCTTCACCTTGGACACTCCTTCTTCCCTCCCCAAAATCTTCTCCTGGAGGAGATTCGAAGTGCACCTTCATCAAATATGGTGATGAATCAGCTACAGAATAGCCCAAATGATACGGTTATGAGTACTCTGCGAGCAGGACCTGAGGAAATCCCTAAGGCTCCCCCGGCAGACAGACCGCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGAAATCCTGATATAAGCCACAGAGAAGCTTTCAGTGCTGCAGCGAAGAATTGGGCCCATTTCCCCCATATCCACTTCGGACTTATGCCTGATCACCAACCCGTGAAGAAAGCTAACGTACGCCAGGAAGGAGAGGACGTGCTTATGAAGGATGGGTATTTTGCTCCTGCAAACGTAGGTGTCTCTCCATTTTAG 660 0.5045 MSASSTASFSPDQHVLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPSANQLHLGHSFFPPQNLLLEEIRSAPSSNMVMNQLQNSPNDTVMSTLRAGPEEIPKAPPADRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVLMKDGYFAPANVGVSPF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0807 219 CDD HMG-box_SF 137 173 - -
Dere11g0807 219 Gene3D High mobility group box domain 123 179 IPR036910 -
Dere11g0807 219 SUPERFAMILY HMG-box 129 177 IPR036910 -
Dere11g0807 219 PANTHER PROTEIN YABBY 6-RELATED 5 195 IPR006780 GO:0007275
Dere11g0807 219 MobiDBLite consensus disorder prediction 119 138 - -
Dere11g0807 219 Pfam YABBY protein 18 183 IPR006780 GO:0007275
Dere11g0807 219 FunFam Axial regulator YABBY 128 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0807 Dere-ChrDere11 15014795 15018013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0807 29 217 C2C2-YABBY Transcription Factor Family AT4G00180 62.679 2.12e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dere11g0807 YABBY 4.1e-73 CL0114