Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0800 ATGGCCAACCATATTTGGACAAGAGAAACCATTCGTACACAATCGAACTCAGCTCAAGCCCCTTCTCTTATCAACAAATTCATCACCATCCCTTCTCTTTTCCGAAATTGTCTTCAAGCCATAGAACAACAACACGTAACCATGACAGCTTTTCGCTTACTAGCAACACTCTTGTTCATTCCCATCTTATATACCTCTTACGTTACTAGTTATTCTCTGAATGACATTAAATCTTGGTGCAGTCAGACCCCTCATCCTCAACCATGTGAGTACTTTTTGAACAATAACCCAACTCATATGCTCAAAACCGTCAAACACAAGGCCGATTTCCTAAAGCTTTCTCTACAACTGGCCCAAGAGCGAGCATTGATTGGCCATGCAAACACTCTTTCACTTGGCCCCAGGTGTCGCAACCCACGCGAAAAGGCTGCATGGGCAGATTGCATTGAGCTTTATGAGCACGCCATCCTCAGACTCAACAGAACCTTGGACCCCAACACCAAGTGCTCCCAAACTGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTTGAGACTTGCCGAGCTGGGTTCTACGAGCTTGGGGTTCAAGACTACGTGTTGCCCATGATGTCCAACAACGTTACTAAGTTGCTGAGCAACACTTTGGCTCTGAACAAGGTTCAATATGAAGAACCAAGTTATAAGGATGGGTTCCCTACATGGGTTAAGCCTGGAGACAGGAAGCTATTGCAGACGTCTTCTCCAGCTTCTCGGGCTAACGTTGTTGTGGCTAATGATGGTTCTGGCAAATACACAACCTTGACTGCAGCTATAAATGCAGCGCCAAAGAGTAGCAGTGGGAGATACGTGATATACGTGAAGGCTGGAGTTTACAATGAACAGGTTGAGATAAAGGCAAACAATATCATGTTGGTGGGAGATGGTATCGGAAAGACTATAATCACCGGTAGTAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACAGTAGGAGATGGATTTATTGCTCAAGACATCACATTCAGAAACACTGCTGGAGCATCAAACCACCAAGCTGTTGCATTGCGTTCTGGTTCAGATTTATCAGTTTTCTATAGGTGTAGCATTGAAGGTTACCAAGATACACTGTATGTGCACTCTGAGAGACAGTTCTACAGGGAATGTGACATTTATGGCACTGTGGACTTTATCTTTGGTAACGCTGCTGTAGTTTTCCAAAATTGTAACCTTTTCGCAAGAAACCCTCCAAACAAAGTGAACACAATCACTGCCCAAGGTCGAACAGATCCAAACCAAAACACTGGTATTTCCATTCACAATTCTAGAGTCACAGCTGCCTCAGATCTGAAGCCAGTTCAAAACTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGCACAGTCTTTATGAAGACTTTCCTAGATAGTTTGATAAACCAGGCTGGTTGGTTGGAATGGAGTGGTAACTTTGCCCTAAACACTTTGTATTATGGTGAGTATATGAATACAGGTCCAGGTTCATCAACGGCAAATCGAGTTAAGTGGTCAGGCTATCATGTCATCAGCAGTGCATCTGAAGCTTCAAAATTCACCGTTGCAAATTTCATTGGCGGCAGCTCATGGTTGCCAGCAACAAGGGTGCCATTCACCTCTGGTTTATAA 1683 0.4444 MANHIWTRETIRTQSNSAQAPSLINKFITIPSLFRNCLQAIEQQHVTMTAFRLLATLLFIPILYTSYVTSYSLNDIKSWCSQTPHPQPCEYFLNNNPTHMLKTVKHKADFLKLSLQLAQERALIGHANTLSLGPRCRNPREKAAWADCIELYEHAILRLNRTLDPNTKCSQTDAQTWLSTALTNLETCRAGFYELGVQDYVLPMMSNNVTKLLSNTLALNKVQYEEPSYKDGFPTWVKPGDRKLLQTSSPASRANVVVANDGSGKYTTLTAAINAAPKSSSGRYVIYVKAGVYNEQVEIKANNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVGDGFIAQDITFRNTAGASNHQAVALRSGSDLSVFYRCSIEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLKPVQNSVKTYLGRPWQQYSRTVFMKTFLDSLINQAGWLEWSGNFALNTLYYGEYMNTGPGSSTANRVKWSGYHVISSASEASKFTVANFIGGSSWLPATRVPFTSGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0800 560 Gene3D - 250 560 IPR012334 -
Dere11g0800 560 FunFam Pectinesterase 71 222 - -
Dere11g0800 560 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Dere11g0800 560 NCBIfam pectinesterase inhibitor domain 52 221 IPR006501 GO:0004857
Dere11g0800 560 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Dere11g0800 560 SUPERFAMILY Pectin lyase-like 249 559 IPR011050 -
Dere11g0800 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 222 IPR035513 -
Dere11g0800 560 PANTHER PECTINESTERASE 60 550 - -
Dere11g0800 560 CDD PMEI-like_3 78 221 - -
Dere11g0800 560 Pfam Pectinesterase 255 545 IPR000070 GO:0030599|GO:0042545
Dere11g0800 560 FunFam Pectinesterase 249 560 - -
Dere11g0800 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 222 IPR035513 -
Dere11g0800 560 SMART PMEI_2 71 219 IPR006501 GO:0004857
Dere11g0800 560 Pfam Plant invertase/pectin methylesterase inhibitor 75 219 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0800 Dere-ChrDere11 14892998 14894807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0800 48 560 Carbohydrate Esterase AT2G45220 67.375 0.0 728