Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0799 ATGGGCTTGACACTTATATTCGTTCCCCTTCTACTTTCCTCTTCAGTTTCTGGGTACTCTTGGAACGATGTTAAGGTGTGGTGCAGCCAAACCCCAAATCCTCAACCTTGTGAGTATTTCCTGAACAGTAGTCCTACTCGCAGCCAGAAGTTCATCAAACACAAAAATGATTTTCTCAAGCTTTCACTGCAACTGGCGCAACAGCGAGCGCTGAAAGGCCATGCAAACTCTCTTTCGTTAGGCCCAAAGTGCAGGAACTCGCTTGAGAAAGCAGCATGGGCGGATTGCATTGAGCTTTACGAGCAGGCCATCCACAGACTCAACAAAACCTTAGACCCCAACACGAAGTGCTCACAAGCCGATGCTCAAACGTGGCTCAGTACAGCTCTCACCAACCTCGAGACATGTAAAGCTGGGTTCTACGAGCTTGGGGTTCAAGACTATTTGTTGCCCTTGATGTCCAACAATGTTACCAAGTTGCGGAGCAACACTTTGGCTATAAACAAGGAAGCTTTTGCAAGGTCTTCTGCAGCTCCTCGGGCTAACGTTGAGGTGGCTAACGATGGCACTGGCAGGTACACAACTATGAGTGCTGCCATAAGTGCAGCATCAAAGAGTAGTAGTGGGAGATACGTGATATACGTGAAGGCTGGAATTTTCAATGAACAGGTTGAAATTAAGGCAAAGAATATCATGCTGGTGGGAGATGGTATTGGGAAGACTATAATCACCGGCAGCAAAAGTGTTGGCGGAGGCACCATAACCTTCCATTCAGCCTCTGTTGGTAGCAAATTTTGTTCATTGGTTTCAATATTTTTCTTGGCTCTCCCTATGCTGGTTTAA 843 0.4662 MGLTLIFVPLLLSSSVSGYSWNDVKVWCSQTPNPQPCEYFLNSSPTRSQKFIKHKNDFLKLSLQLAQQRALKGHANSLSLGPKCRNSLEKAAWADCIELYEQAIHRLNKTLDPNTKCSQADAQTWLSTALTNLETCKAGFYELGVQDYLLPLMSNNVTKLRSNTLAINKEAFARSSAAPRANVEVANDGTGRYTTMSAAISAASKSSSGRYVIYVKAGIFNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTITFHSASVGSKFCSLVSIFFLALPMLV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0799 280 Pfam Pectinesterase 182 263 IPR000070 GO:0030599|GO:0042545
Dere11g0799 280 PANTHER PECTINESTERASE 15 263 - -
Dere11g0799 280 Gene3D - 177 268 IPR012334 -
Dere11g0799 280 SMART PMEI_2 19 167 IPR006501 GO:0004857
Dere11g0799 280 FunFam Pectinesterase 19 170 - -
Dere11g0799 280 Pfam Plant invertase/pectin methylesterase inhibitor 24 167 IPR006501 GO:0004857
Dere11g0799 280 NCBIfam pectinesterase inhibitor domain 4 170 IPR006501 GO:0004857
Dere11g0799 280 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 171 IPR035513 -
Dere11g0799 280 SUPERFAMILY Pectin lyase-like 176 261 IPR011050 -
Dere11g0799 280 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 169 IPR035513 -
Dere11g0799 280 CDD PMEI-like_3 27 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0799 Dere-ChrDere11 14874357 14875261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0799 3 263 Carbohydrate Esterase AT2G45220 53.381 2.54e-102 306