Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0798 ATGGCCAACCATATTTGGACAAGAGAAACCATTCGTACACAATCGAACTCAGCTCAAGCCCCTTCTCTTATCAACATATTCATCACCGTCCCTTCTCTTTTCCGAAATTGTCTTCAAGCCATAGAACAACAACACGTAACCATGACAGCTTTCCGCTTACTAGCAACACTCTTGTTCATTCCCATCTTATATACCTCTTACGTTACTAGTTATTCTCTGAATGACATTAAATCTTGGTGCAGTCAGACCCCTCATCCTCAACCATGTGAGTACTTTTTGAGCAATAACCCAACTCATATGCTCAAAACCGTCAAACACAAGGCCGATTTCCTAAAGCTTTCTCTACAACTGGCGCAAGAGCGAGCATTGATTGGCCATGCAAACACACTTTCACTTGGCCCCAGGTGTCGCAACCCACGCGAAAAGGCTGCATGGGCAGATTGCATTGAGCTTTATGAGCACACCATCCTCAGACTCAACAGAACCTTGGACCCCAACACCAAGTGCTCCCAAACTGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTTGAGACTTGCCGAGCTGGGTTCTACGAGCTTGGGGTTCAAGACTACGTGTTGCCCATGATGTCCAACAACGTTACTAAGTTGCTGAGCAACACTTTGGCTCTGAACAAAGTTCAATATGAAGAACCAAGTTATAAGGATGGGTTCCCTACATGGGTTAAGCCTGGAGACAGGAAGCTATTGCAGACGTCTTCTCCAGCTTCTCGAGCTAACGTTGTTGTGGCTAAAGATGGTTCTGGCAAATACACAACCTTGACTGCAGCTATAAATGCAGCGCCAAAGAGTAGCAGTGGGAGATACGTGATATACGTGAAGGCTGGAGTTTACAATGAACAGGTTGAGATAAAGGCAAACAATATCATGTTGGTGGGAGATGGTATCGGAAAGACTATAATCACCGGTAGTAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACAGTAGGTAAGTCAAATTTGTTTCTGAGTCTCATGTTTCAACTTAATTTTAAGCCCTACCAAATGATTAAAATGAAAAACAAAATGGAAAGATTGAGAACTTAG 1101 0.4432 MANHIWTRETIRTQSNSAQAPSLINIFITVPSLFRNCLQAIEQQHVTMTAFRLLATLLFIPILYTSYVTSYSLNDIKSWCSQTPHPQPCEYFLSNNPTHMLKTVKHKADFLKLSLQLAQERALIGHANTLSLGPRCRNPREKAAWADCIELYEHTILRLNRTLDPNTKCSQTDAQTWLSTALTNLETCRAGFYELGVQDYVLPMMSNNVTKLLSNTLALNKVQYEEPSYKDGFPTWVKPGDRKLLQTSSPASRANVVVAKDGSGKYTTLTAAINAAPKSSSGRYVIYVKAGVYNEQVEIKANNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVGKSNLFLSLMFQLNFKPYQMIKMKNKMERLRT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0798 366 FunFam Pectinesterase 71 222 - -
Dere11g0798 366 CDD PMEI-like_3 78 221 - -
Dere11g0798 366 NCBIfam pectinesterase inhibitor domain 52 221 IPR006501 GO:0004857
Dere11g0798 366 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Dere11g0798 366 Gene3D - 250 350 IPR012334 -
Dere11g0798 366 PANTHER PECTINESTERASE 60 336 - -
Dere11g0798 366 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 222 IPR035513 -
Dere11g0798 366 SUPERFAMILY Pectin lyase-like 249 335 IPR011050 -
Dere11g0798 366 Pfam Plant invertase/pectin methylesterase inhibitor 75 219 IPR006501 GO:0004857
Dere11g0798 366 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 222 IPR035513 -
Dere11g0798 366 SMART PMEI_2 71 219 IPR006501 GO:0004857
Dere11g0798 366 Pfam Pectinesterase 255 336 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0798 Dere-ChrDere11 14865188 14866288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0798 48 334 Carbohydrate Esterase AT2G45220 60.900 1.36e-124 367