Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0796 ATGGCAGCTTTGTTCAACTTTCTCTTTTCATTTCTTACTGTTGCATTCTTGTTTGCCTCTATTGTTTCTGGCTATGATTTAAATGACATCAAACAGTGGTGCAGCCAAACTCCTAATCCTCAACCATGTGAGTATTTCTTGAGTAATAACCCTACTCACCAACACAAACCCATCAACAGCAAAGCTGATTTCTTCCAACTTTCTCTTCAACTTGCTCAAGAGCAAGCTCTAATAGGCCATGCAAACACCCTTTCACTTGGCTCTAAGTGTCGAAATCCAAGGGAAAAAGCTGCGTGGGCTGATTGCCTAGAGTTGTATGAGCACACCATCCACAAACTCAACAAAACGTTAGATTCCAACACCAAATGCACCCGAACTGATACACAAACGTGGCTTAGCTCGGCTCTGACAAATCTTGAGGCATGTAAACTTGGATTTTATGAGCTTGGGGTTGAAGACTACTTGTTGCCCTTGATGTCCAACAATGTCACCAAGTTGTTAAGCAATACTTTGGCTTTGAACAAGATTTCTTCACCATCTTCTCAGGCTAATGCCATGGTGGCTAAAGATGGATCAGGCCACTACACAACAGTGAGTGCTGCCATAAATGCGGCACCAAAGAGTAGTAGCGGGAGGTATGTTATACACGTGAAGGCAGGAATATACAATGAACAAGTTGAGATAAATTCGAATAATATCATGTTGGTGGGAGACGGTATTGGAAAGACTATAATTACGGGTAGCAACAGTGTTGGAGGGGGCATCACTACCTTCCGTTCTGCAACCGTTGATGACGTTTTCATTTCTTTCTGTGTCAACCCAAGTCCTGAGGTATTTCCCCAGCCTAATATGGGTTATATGTGTCCTGAAAGAGAGTTCCCTGAGAATGACTTCTCTTATTGTGAGCATTGCCTCCTTAGAATCACCTCTCAATAG 936 0.4274 MAALFNFLFSFLTVAFLFASIVSGYDLNDIKQWCSQTPNPQPCEYFLSNNPTHQHKPINSKADFFQLSLQLAQEQALIGHANTLSLGSKCRNPREKAAWADCLELYEHTIHKLNKTLDSNTKCTRTDTQTWLSSALTNLEACKLGFYELGVEDYLLPLMSNNVTKLLSNTLALNKISSPSSQANAMVAKDGSGHYTTVSAAINAAPKSSSGRYVIHVKAGIYNEQVEINSNNIMLVGDGIGKTIITGSNSVGGGITTFRSATVDDVFISFCVNPSPEVFPQPNMGYMCPEREFPENDFSYCEHCLLRITSQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0796 311 SMART PMEI_2 25 173 IPR006501 GO:0004857
Dere11g0796 311 NCBIfam pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Dere11g0796 311 Gene3D - 178 269 IPR012334 -
Dere11g0796 311 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 176 IPR035513 -
Dere11g0796 311 SUPERFAMILY Pectin lyase-like 180 263 IPR011050 -
Dere11g0796 311 ProSitePatterns Pectinesterase signature 1. 209 228 IPR018040 -
Dere11g0796 311 CDD PMEI-like_3 33 175 - -
Dere11g0796 311 PANTHER PECTINESTERASE 16 266 - -
Dere11g0796 311 Pfam Pectinesterase 184 264 IPR000070 GO:0030599|GO:0042545
Dere11g0796 311 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 176 IPR035513 -
Dere11g0796 311 Pfam Plant invertase/pectin methylesterase inhibitor 29 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0796 Dere-ChrDere11 14827152 14829875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0796 1 270 Carbohydrate Esterase AT2G45220 50.680 3.23e-101 304