Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0795 ATGCTCAAAACCGTCAAACACAAGGCCGATTTCCTAAAGCTTTCTCTACAACTGGCCCAAGAGCGAGCATTGATTGGCCATGCAAACACTTTCTCACTTGGCCCCAGGTGTCGCAACCCACGCGAGAAGGCTGCATGGGCTGACTGCATTGAGCTTTATGAGCACGCCATCCTCAGACTCAACAGAACCATTGACCCCAACACCAAGTGCTCCCAAACTGATGCTCAGACATGGCTCAGCACAGCTCTCACCAACCTTGAGACTTGCCGGGCTGGGTTCTACGAGCTTGGGGTTCAAGACTATGTCTTGCCCATGATGTCCAACAACGTTACTAAGTTGCTGAGCAACACTTTGGCTCTAAACAAGGTTCAATATGAAGAACCAAGTTATAAGGATGGGTTCCCTACATGGGTTAAGCCTGGAGACAGGAAGCTGTTGCAGACGTCTTCTCCAGCTTCTCGGGCTAACGTTGTCGTGGCTAAAGATGGTTCTGGCAAATACACAACCTTGACTGCAGCTATAAATGCTGCACCAAAGAGTAGCAGTTGGAGATACGTGATATACGTGAAGGCTGGAGTTTACAATGAACAGGTTCAGATAAAGGCAAACAATATCATGTTGGTGGGAGATGGTATCGGAAAGACTATAATCACCGGTAGTAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACAGTAGGTAAGTCAAATTTGTTTCTAGAGTCTCTTGTTTCAACTTAA 747 0.4739 MLKTVKHKADFLKLSLQLAQERALIGHANTFSLGPRCRNPREKAAWADCIELYEHAILRLNRTIDPNTKCSQTDAQTWLSTALTNLETCRAGFYELGVQDYVLPMMSNNVTKLLSNTLALNKVQYEEPSYKDGFPTWVKPGDRKLLQTSSPASRANVVVAKDGSGKYTTLTAAINAAPKSSSWRYVIYVKAGVYNEQVQIKANNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVGKSNLFLESLVST 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0795 248 NCBIfam pectinesterase inhibitor domain 12 122 IPR006501 GO:0004857
Dere11g0795 248 Pfam Plant invertase/pectin methylesterase inhibitor 10 120 IPR006501 GO:0004857
Dere11g0795 248 CDD PMEI-like_3 10 122 - -
Dere11g0795 248 Gene3D - 151 244 IPR012334 -
Dere11g0795 248 Gene3D Invertase/pectin methylesterase inhibitor family protein 3 123 IPR035513 -
Dere11g0795 248 ProSitePatterns Pectinesterase signature 1. 181 200 IPR018040 -
Dere11g0795 248 PANTHER PECTINESTERASE 9 237 - -
Dere11g0795 248 SMART PMEI_2 1 120 IPR006501 GO:0004857
Dere11g0795 248 Pfam Pectinesterase 156 237 IPR000070 GO:0030599|GO:0042545
Dere11g0795 248 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 123 IPR035513 -
Dere11g0795 248 SUPERFAMILY Pectin lyase-like 150 235 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0795 Dere-ChrDere11 14818972 14819718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0795 5 235 Carbohydrate Esterase AT2G45220 64.224 9.04e-105 311