Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0794 ATGATCACTCGGGCCTCTATCTCCTTTCTCTTTCTTCTTCTTTTTCAGGCTCTAGCTATGACCACCTCCATCTCTGGCCAACACATGGACGCTCTTCGCATGGCTCACACCCAGGTTTCGCAAGCCAGAAACTGTTTCAAAAATTCCACGAGTTTCCATGGACCACGAGGCCATAAGGTAGCCGTGGCTCTTAGAGACTGTGCAAAGCTTTACGGCGAGAGCGAGCTCCGGCTAGCTCGCATGTTGTCTATGAAAGACTCTTACACTGCAGACGAAGAGCTTTCATGGCTATCCGCAGTGATGGCAAATCACAGAACGTGTTTGGATGGCTTAACCCAAAATGGGTATGATAAAGGCTATGTTGTGGGAATGAACTTAACAATTTCCCTCAATGATGCTCTTACCTTATCTGGTAATAATATGGCCCAGTCCCAGATGGAGAAGAAACAACGAGAAGTAGAGAAAGATAATGGAAGTAACGAAGAACAGGGTGGTCTTCTGGCATCATGGAACTCAGGGAGCTCCAAGGCGGACTTCACGGTGGCTCAGAACGGTTCAGGTACGCACAAAACAATCAGAGAAGCAGTCGATGCTTTGGCCGCAAAGGGTCACGACCGTCCAGATCGAGTGATCATCTACGTGAAATCAGGAGTTTACAAGGAGAAAGTAGAGATTCCACAGAATCTGTACAATGTGATGCTGGTGGGTGATGGCATAGACATGACCATTGTTACTGGTGATATGGACATTGCTGGAGCTGGCTCCACCCTGAATTCAGCTACATTTGATGTATCCGGTGATGGCTTTTGGGCAAGGGACGTGACGTTCGAGAATACAGCAGGCCCTGAGAAACACCAAGCAGTGGCAATAAAGGTGAGCTCAGACAAATCCGTCTTCTACAGATGCAGCTTCAAGGCTTACCAGGACACTCTCTACGCCCATTCCAACCGACAATTCTACCGCAACTGCCAAATCTCCGGCACCGTTGACTTCATCTTTGGCGACGCCTCCGCCGTCTTCCAAGACTCCGACATCTTCGTCAGAAAGCCCATGCAAAACCAGTTCACCTCCGTGACAGCCCACGGCAGAGGGAACTCGGACGAGCCCACTGGATTCGTCGTCCATGGCTGCCGAGTGAGGCCCTCTTCTGATCTCGATGATGCCAAGGGGTCGTTCAGCAGCTACCTGGGGAGGCCATGGAAGGAGTATTCGAGGACTGTGTTTATGAAGACGGAGATCGATGGGTTTATCGACCCCAAAGGGTGGAAGGAATGGGAAGGAGACTTTGCTCTTTCTACGCTGTATTATGGTGAGTTTATGAACACTGGGAATGGTGCTTCTACTGAGAACAGGGTGAACTGGCCGGGGTTTCATGCGATTGGGGAGAGTGAAGCGGATGCTTTTACGGTGGGTCGTTTTATGGACGGTGAATCGTGGATTGGACAAACCGGCGTGCCGTTTTGGGCCGGGATTTGA 1476 0.5034 MITRASISFLFLLLFQALAMTTSISGQHMDALRMAHTQVSQARNCFKNSTSFHGPRGHKVAVALRDCAKLYGESELRLARMLSMKDSYTADEELSWLSAVMANHRTCLDGLTQNGYDKGYVVGMNLTISLNDALTLSGNNMAQSQMEKKQREVEKDNGSNEEQGGLLASWNSGSSKADFTVAQNGSGTHKTIREAVDALAAKGHDRPDRVIIYVKSGVYKEKVEIPQNLYNVMLVGDGIDMTIVTGDMDIAGAGSTLNSATFDVSGDGFWARDVTFENTAGPEKHQAVAIKVSSDKSVFYRCSFKAYQDTLYAHSNRQFYRNCQISGTVDFIFGDASAVFQDSDIFVRKPMQNQFTSVTAHGRGNSDEPTGFVVHGCRVRPSSDLDDAKGSFSSYLGRPWKEYSRTVFMKTEIDGFIDPKGWKEWEGDFALSTLYYGEFMNTGNGASTENRVNWPGFHAIGESEADAFTVGRFMDGESWIGQTGVPFWAGI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0794 491 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 18 128 IPR035513 -
Dere11g0794 491 Pfam Pectinesterase 178 476 IPR000070 GO:0030599|GO:0042545
Dere11g0794 491 PANTHER PECTINESTERASE 30 481 - -
Dere11g0794 491 MobiDBLite consensus disorder prediction 141 171 - -
Dere11g0794 491 Gene3D Invertase/pectin methylesterase inhibitor family protein 16 146 IPR035513 -
Dere11g0794 491 Gene3D - 172 491 IPR012334 -
Dere11g0794 491 Pfam Plant invertase/pectin methylesterase inhibitor 32 118 IPR006501 GO:0004857
Dere11g0794 491 SUPERFAMILY Pectin lyase-like 175 490 IPR011050 -
Dere11g0794 491 ProSitePatterns Pectinesterase signature 2. 325 334 IPR033131 -
Dere11g0794 491 FunFam Pectinesterase 172 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0794 Dere-ChrDere11 14778127 14781687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0794 7 491 Carbohydrate Esterase AT3G60730 49.708 7.44e-180 513