Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0792 ATGGCACATCTCAGCCTCACGTTGCTGATCATCTTTATCCTCCCTTTCTTCTCAAGTTTGGCCACAGCTGAACCAGAACCATCCATGGCCAAACTTCCCAGACACATTCCTAAAACCATGGCCTACATAAAGGCCTCATGCCAAACCACTCTCTATCCCAAACTATGCATGAACTGCTTAGCCAGATTTGCCAACTCCACAATACAAAGCCCACAACACCTAGCACATGTGGCTTTAGCAGTGAGTCTCTCAAGAGCCCTACACACAAGAAAGTACTTGCTGAAAGTGGCCAAGGAATTTAGGGCACTGAAGAACAATAGAGACTACCTGGTTGTGCAGGATTGCGTGAGGCAAATCAATGATAGTGTGGACCAGCTTGGCCTTTCCATAAAGGAGCTCCAGCGGCTGAACCGGATTGACGGCGCTGTCATCAACGACAACGTCCTGTGGCACATAAGCAACGTCGAGACGTGGGTGAGCACTGCCCTAACTGATGCTAGCACGTGCGTGGACTCGTTCCCAGGTCATAGGATGAGTAAAATGAAGGCAACGATTAGGGGTAAGGCCATGAATGTTGCACAGGTTACTAGCAATGCACTTGCCATATTTCACAAATATGCAGCTAAGTACCGAGCAGCAGCAGCAGCAAAGATACCCTAA 660 0.4864 MAHLSLTLLIIFILPFFSSLATAEPEPSMAKLPRHIPKTMAYIKASCQTTLYPKLCMNCLARFANSTIQSPQHLAHVALAVSLSRALHTRKYLLKVAKEFRALKNNRDYLVVQDCVRQINDSVDQLGLSIKELQRLNRIDGAVINDNVLWHISNVETWVSTALTDASTCVDSFPGHRMSKMKATIRGKAMNVAQVTSNALAIFHKYAAKYRAAAAAKIP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0792 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 202 - -
Dere11g0792 219 NCBIfam pectinesterase inhibitor domain 5 206 IPR006501 GO:0004857
Dere11g0792 219 Pfam Plant invertase/pectin methylesterase inhibitor 42 202 IPR006501 GO:0004857
Dere11g0792 219 FunFam Pectinesterase inhibitor 3 38 207 - -
Dere11g0792 219 CDD PMEI-like_3 45 204 - -
Dere11g0792 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 206 IPR035513 -
Dere11g0792 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 206 IPR035513 -
Dere11g0792 219 SMART PMEI_2 38 202 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0792 Dere-ChrDere11 14693613 14694272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0792 4 203 Carbohydrate Esterase AT5G53370 25.121 8.51e-13 65.1