Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0766 ATGGAGCAGGTGGTCATCTCCATGGAGCAACAACACCCAAACCCTAAACTCGATCATTCTTCCCAATTCCAACCCAAAAATAGAACACTAAAACGCCTCAATTTTTCTAAACCAAGGTCACGTTTTGAGGAGATCAACTACCCCATCGCACTACCACTACCACCAAAACCCATTCTTGAGTCAGAAGAGCAACAGCCCTTGAATTCGCAATCAGATAACCGTAATAGTTACTCTTCCACAGACGACGACGACGACGACGACGACTACGAAGAATGGTTCGAAAACGGAGACGAGTACGGGGGAGACGTGGACGAAACCGACGGAAAGTACAGAAAAAAGAGGAAGAGGAAGATCAACAAGAGGGCTTTAATGGAGTGGACTTTGTTCCTCGCCATCATGACTTGCCTGGTATGCTCTCTCACCATTAAATCCCTCAAGCACAAGCTCCTGTGGGGCTTACAAGTCTGGAAATGGTGCTTACTGGTGATGGTAATCTTCTGTGGCCGTCTTGTCTCCGGTTGGGTAGTCAGAGTGCTAGTGTTTCTCATTGAACGGAACTTCATGTTGAGAGAGAAAGTACTGTACTTCGTGTACGGTCTTCGAAAGAGTGTTCAAAACTGCGTATGGCTAGGCCTAGTGTTAGTGGCATGGATGATTATGTTCCATGACGTCCATAAACACAACAAAGTGCTCAGAAAGTTCTTCAGGGCTCTCGTGGCCGTCCTGATTGGCGCAACCATTTGGCTGTTGAAAATAGTATTAGTGAAGGTTCTTGCGTCGTCGTTCCATGTGGCGACTTTCTTTGACAGGATGAAAGAGAGTGTTTTCCATCACTATGTGTTGGAGGCACTGTCGGGGCCACCATTGGAGGAGGCGGAGATGGAGCTGACACGGCGGCACTTGCAGGCGTCGAAGTCGTTGCCGGCTAGGTTGAGTTATGGGAAGTCTGGGCCGTTGTCGAGGTCGAAGAAGGGTGATGGGTCGAGGAGGATTGACATAGAGAAGCTCAAGAGGCTGAGCATGGACGGCAGAGCCACGGCGTGGAGCGTGAAGAGGCTGGTGAGCTACGTGATGTCGTCGGGGCTGTCGACGATCTCGAGGACGGTGGACGATTTTGCAAACGCCGAGTCGGAGATCACCAGCGAGTGGGAGGCTAGGACTTGTGCACAGAGGACTTTCAAGAATGTGGCGAAGGATGGAGCCAAATACATTGAAGAAGAAGATTTACTCAGGTTCTTGAAGAGAGACGAAGTTCACATGATATTTCCTTTATTTGAAGGTGCACTTGAAACTGGAAAAATTAAGAAGTCTTCATTTCGAAATTGGGTGGTACATGCCTACATTGAAAGAAAAGCTTTGGCTCATTCTTTGAATGATACAAAGACGGCTGTTCATCAACTGCACAAACTGGCAAGTGCAATTGTAGTTGTGATCATAACAGTGGTCTCACTTCTGGTGATGGGCTTGGCCACAACCAAAGTCATCTTTGTGGTCACATCTCAACTCTTGCTCGTGGGTTTCATGTTCCAAAACATGTGCAAAACTGTCTTTGAATCCATTATTTTTGTTTTCGTCATGCACCCTTTCGACGTGGGAGATCGGTGTGTCATTGATGGCACACAGATGATCGTAGAAGAGATGAACATATTGACAACAGTATTCTTAAGATATGACAATGAGAAAATATACTATCCCAATTCTGTTCTTCTCACAAAACCTATAAGCAATTTCAGAAGAAGTCCGGATATGGCTGATACTGTGGACTTCACAATTGATGCGTCTACCCCTGTGGATAATGTCGCTGCCGTCAAGAAGGCTATACAAACGTACATTGAGAGCAAACCCAAGCACTGGAGCCCAAAACACACGGTTATTGTGAAGGAAATAGAGAACATGGACAAGATGAAGATGTGTCTATGTGTTCAACACACCATAAACCATCAAAACTTTGGTGAGAGGAATAGCAGAAGATCAGAGCTCTTGATGGAACTGAAAAAGATTTTTGAGAACCTTGGCATCAAGTACCGTCTTCTTCCTCAGGAAGTACATCTCACACAAGTTAACTTGAGAAATGGAGCTTTCCCACTATCATCTTGA 2097 0.4597 MEQVVISMEQQHPNPKLDHSSQFQPKNRTLKRLNFSKPRSRFEEINYPIALPLPPKPILESEEQQPLNSQSDNRNSYSSTDDDDDDDDYEEWFENGDEYGGDVDETDGKYRKKRKRKINKRALMEWTLFLAIMTCLVCSLTIKSLKHKLLWGLQVWKWCLLVMVIFCGRLVSGWVVRVLVFLIERNFMLREKVLYFVYGLRKSVQNCVWLGLVLVAWMIMFHDVHKHNKVLRKFFRALVAVLIGATIWLLKIVLVKVLASSFHVATFFDRMKESVFHHYVLEALSGPPLEEAEMELTRRHLQASKSLPARLSYGKSGPLSRSKKGDGSRRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEITSEWEARTCAQRTFKNVAKDGAKYIEEEDLLRFLKRDEVHMIFPLFEGALETGKIKKSSFRNWVVHAYIERKALAHSLNDTKTAVHQLHKLASAIVVVIITVVSLLVMGLATTKVIFVVTSQLLLVGFMFQNMCKTVFESIIFVFVMHPFDVGDRCVIDGTQMIVEEMNILTTVFLRYDNEKIYYPNSVLLTKPISNFRRSPDMADTVDFTIDASTPVDNVAAVKKAIQTYIESKPKHWSPKHTVIVKEIENMDKMKMCLCVQHTINHQNFGERNSRRSELLMELKKIFENLGIKYRLLPQEVHLTQVNLRNGAFPLSS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0766 698 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 16 687 IPR016688 -
Dere11g0766 698 MobiDBLite consensus disorder prediction 1 106 - -
Dere11g0766 698 Gene3D - 528 577 IPR023408 -
Dere11g0766 698 MobiDBLite consensus disorder prediction 1 31 - -
Dere11g0766 698 FunFam Predicted mechanosensitive ion channel 528 577 - -
Dere11g0766 698 Pfam Mechanosensitive ion channel 469 674 IPR006685 GO:0016020|GO:0055085
Dere11g0766 698 SUPERFAMILY Sm-like ribonucleoproteins 518 577 IPR010920 -
Dere11g0766 698 MobiDBLite consensus disorder prediction 62 76 - -
Dere11g0766 698 PIRSF Memb_At2g17000 112 693 IPR016688 -
Dere11g0766 698 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0766 Dere-ChrDere11 14241184 14250195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0766 26 688 Mechanosensitive Ion Channel Family AT5G12080 47.042 0.0 613