Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0741 ATGTGGAAATGGAAGCTGACGCCTCGAGACAGGAACCTTGAGGTTCTCATACATGAAAAAAGTATCCTCAAATCCCTAATTTCTCTTCGAAGTTCTCTCCTTTACTCTGTCAACCCTCACCGTATTTCCGTCGACCTGAGCAACATATTCAGTGGTATTGAGCGTCGCACAAGTGGTTCGTCTGCCAGTGCTGCAACCGTTGCCTCCATCGCCGATGATACTCATGCTCGACCCTGTTCGGATGCTCAGCCTTCCAAGTTCGGCATCCAGCATTTCTTCGAGCGCCATACCCAGAATGCTATTCTGGCCTCTCAGAAGCAGCCAAAGAGTAATGCAACTGCAAACTGTCCCAGTTTTGCTCCTGATGATTCCAAATCTGTTGCACCTCCGAGCTCTCGGATTATTCCAAATGTTGCTGGGTCGGAAGCTGTTACTCTTAATAATTTAGATTCTGTTCTTCTCAAAGCTGAAAATGGTTTGAACTCAGAAGCGGCTGGTCTGAAAATCGTGAATTTAGGGTTGCAAAATCCCAAAGACATCCCGCCATTACCGGAAAATGAAGTCAATTACATGTCGCAAAATACTCCTTCAGAGAATTTGGTAAAACCATGGTTTAATGCAGCGGAGAATCTTCCTGAGGTGTCTCCGGAAGTATCCAAGACTGTGCCCCATAAGCGCTTTAAATTCTCACCTGGGATGTTTATAAAGCAGAGCCAGGATGATGGGGTTGAGGAGGTTACATGGAAGATATCTCCTGTGAATGAAAGACTCCACGCAACTTCTCTGAGTAAAAATGGCCTAGTTGAAAAGCTGCTTACTTCACCCACTCCCAAGCCTGCTGAAATATCAATGGTGTCAGTAAATAAAACAGGCTTGAAAAGGACAAATCCTGACCAAGACATGGGTTTAAATGTCAGTGCTACTTCTATGAGTAATTCTGGAGTGACTAATGGACAGAGTCCCTTCAGAACTCCACCATCTTTATCTTATTGCCCTGATAAGGTACAACTTGTTGGGGATGTTGACCACAAAGGACCATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAATTGTTAGATCAAGTCGAAGATGCCATTTGTGTTGAAGATGCTACAATTTGTAATAAAAGCGCATATTACTTTAAATCTCAAGATGGAATTAGTGATAATATGCCTGTTAGAGTTGATCATGCAGTAGAAAGGACAATATCTCATACACCTGAGGAGGCCATTTGTGTGTCCAATTCTAATTATTTGGTATTGGAGGTGTCTGAAAAGCATAGACCTGCTGACTCATCTGCTGCTCAATGCCGATACAAGGTGCTTCGTTTACTCAATGAACAAACTGGAGAAGAGCGGGCCGTAGACTTGTGGGAAGAGTGGTCTTACAGTGTTATTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATAAGGGAAATTGTGATGTAGATCATGATAATAATTTTTTGATTGTAAACCCAGATATTCTGGTGTCTGGAACTCGGGTTGCTGCTAGTTTTAGTTGTCCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATACAATGAGTACTCAATTTCAGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGCACTTATGAAGGATAGTCCTACGAAAAACTTCCTAGAGGAATATGCACGAGTGGTATTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTTCACAAAGCCTTGATAGATGCTATCCCAAGAATATTAAACTGGATCAAACTGTTCAAGAATTCAGAGGAAAGGAAAGATGCTTATGTTGATTTTGGACATGATGATGGGATAAAGAAAGTTGACATATCTGAGGTAATTGATATTGAGGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCTATCAGTGTGAAGGTTCAACCAAGGGAAAATGAAGCTGATGAGAAGATCATGCCATTAGAGTTCAAAACTGGAAAAGCAACGTATAGCCAGTCATCTATAGAACACCGTGCCCAAGTAATCTTATACACTCTCCTGATGTCTGAAAGGTACCAGAAGACCATTGATTCTGGTCTTCTCTATTATCTCCAGTCAGATCAGACAGAGGGAATTGTGGTTCAAAGACCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCAAGTGATATTCTTAAGGCATTAACCATGCAACAGCTGCCTCCAATGTTACAGAGTCCTAGCATTTGCAAAGGCTGTCGCCATCTTAATGTCTGTAGCATTTATCATAAGGTGCATGGTGGAAGCACAGAGAGTAGTGGATTGGGAGATGTGTTTGATTCGCATACTAATCACCTGTCATTTGCTCATTCTAAGTTCCTCTGTCATTGGGATCGTCTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGTAAAGAAAGAGATGTGGCGATCACATAACTTGAAGAATCAGAGCAGAGGTGGCCTTTCCTCTATTATTCTTGATGCTTCAAATGGGATTCCGTATCAGAAATCTCTCAAAGATAATTGTTTCATTTATCGTTTTGTGCGACATGATCTCTCCTCTCTCTCTGAAGTGTCTGATGGTGGTCCTTCGAGTGATTCAACAAATTATTTAGATCTCATACTTAGAAGTGGAGACTATGTGATAGTAAGCACTGAATCTAGCCGTCAAACTATCGCAAGTGGAGTGATAACAGATATTAGTCATGCTCATGTTTCTGTTTCCTTTTCAAAGCGCTTGCGGATTCCTGGGAGCACTTCCACTACACAAGATCTCCTTAAACAGGTTTGGAGAATTGATAAGGATGAAGTTGTGACCTCATTTGCTGTCATGAGGTTTAATATGGTACAACTGTTTCTACAAAATGATCGAAGTACTCATCTACGGAGGATGATTGTTGATCTTGAGGCTCCTAAATTTGACAGTGGATCTATGGTCAGTCAGGATCCAGCAATATCATATGTGTGGTCAGAGAAGGATTTGAATGATGATCAACGTAGGGCAATTCTCAAGATACTTACAGCAAAGGATTACGCACTTATACTGGGGATGCCTGGAACAGGGAAGACATCCACCATGGTTCATGCTGTGAAAGCCTTATTAATTAGAGGTTCATCTATTTTGCTGACGGCCTATACAAACTCTGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGACATTGATTTTGTACGTATTGGAAGACATGAAGTTGTGCATGAGGAGGTTAGAGGACACTGTCTTTCAGCAACCAATGTACAAAATGTTGAAGAGATCAAAATAAGGCTAGAACGGGTTAAAGTTGTTGCAGTTACTTGTCTGGGAATTACCAGTCCCTTGCTTGCCAACAGGACATTCGATGTTTGCATTATGGACGAAGCTGGGCAGACAACTTTACCAGTGTCCTTGGGCCCTCTCATATTTTCCTCAATGTTTGTGCTTGTTGGGGATCATTATCAACTTCCTCCGCTTGTCCAGAGTACTGAGGCTCGAGAGAATGGAATGGGGATAAGTTTGTTTTGTAGGCTCTCTGAAGCACATCCACAAGCAATTTCAGCACTACAGTGTCAGTACCGTATGAGTCAGGGCATTATGGACTTGTCAAATTCCTTGATATATGGCAATAGGTTGAGGTGCGGTTCCTCTGAGATAGCTAATGCAAAACTTGAGTATTCTAGCTTAAAAAGTGTCTTGCCTTGGCTAAAAAATGTTTTGAATCCAGGCAGGCCGGTGATCTTTATTAACACTGATAAATTGCCTGCTTTAGAGGCGAGAGAACAGAAGATTGTAAATAACCCTATTGAAGCTCTCATAATTGCTGAGATTGCAAAGGAATTGATAAAAAATGGAATTGGGGAAGGACAGATTGGCATTATTACCCCTTACAATTCTCAGGCGAACCTCATCCGACATGCTGCTTGCATGACTTCATTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAGGAATGCATATTAGTATCTTTTGTGAGGTCTTGTGAAAATCCATCAAGCTATGCTTCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACTCGTGGCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAAAACCCTATCAAAGGTTCCACTACTAAAGCTTCTCATCAAGAAGGTTGAGGAGCAGTCAGGGATTTTGAGTGTGTCTAAGAAGGACATCTATCAAAAAGGAGAGCTAAAAAGGTGTTCCCAGATAAGATGA 4296 0.4148 MWKWKLTPRDRNLEVLIHEKSILKSLISLRSSLLYSVNPHRISVDLSNIFSGIERRTSGSSASAATVASIADDTHARPCSDAQPSKFGIQHFFERHTQNAILASQKQPKSNATANCPSFAPDDSKSVAPPSSRIIPNVAGSEAVTLNNLDSVLLKAENGLNSEAAGLKIVNLGLQNPKDIPPLPENEVNYMSQNTPSENLVKPWFNAAENLPEVSPEVSKTVPHKRFKFSPGMFIKQSQDDGVEEVTWKISPVNERLHATSLSKNGLVEKLLTSPTPKPAEISMVSVNKTGLKRTNPDQDMGLNVSATSMSNSGVTNGQSPFRTPPSLSYCPDKVQLVGDVDHKGPSDQLYLRQHKKALLELLDQVEDAICVEDATICNKSAYYFKSQDGISDNMPVRVDHAVERTISHTPEEAICVSNSNYLVLEVSEKHRPADSSAAQCRYKVLRLLNEQTGEERAVDLWEEWSYSVIAPGDTVNIIGQFDDKGNCDVDHDNNFLIVNPDILVSGTRVAASFSCPRRTVLDERLKYNEYSISALTGTLLHQIFQAALMKDSPTKNFLEEYARVVFQRNIESLYACGVNENDVHKALIDAIPRILNWIKLFKNSEERKDAYVDFGHDDGIKKVDISEVIDIEEMAWAPKYGLKGMIDASISVKVQPRENEADEKIMPLEFKTGKATYSQSSIEHRAQVILYTLLMSERYQKTIDSGLLYYLQSDQTEGIVVQRPDLVGLIMRRNELASDILKALTMQQLPPMLQSPSICKGCRHLNVCSIYHKVHGGSTESSGLGDVFDSHTNHLSFAHSKFLCHWDRLIDLEAKETELVKKEMWRSHNLKNQSRGGLSSIILDASNGIPYQKSLKDNCFIYRFVRHDLSSLSEVSDGGPSSDSTNYLDLILRSGDYVIVSTESSRQTIASGVITDISHAHVSVSFSKRLRIPGSTSTTQDLLKQVWRIDKDEVVTSFAVMRFNMVQLFLQNDRSTHLRRMIVDLEAPKFDSGSMVSQDPAISYVWSEKDLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLTAYTNSAVDNLLIKLKAQDIDFVRIGRHEVVHEEVRGHCLSATNVQNVEEIKIRLERVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLIFSSMFVLVGDHYQLPPLVQSTEARENGMGISLFCRLSEAHPQAISALQCQYRMSQGIMDLSNSLIYGNRLRCGSSEIANAKLEYSSLKSVLPWLKNVLNPGRPVIFINTDKLPALEAREQKIVNNPIEALIIAEIAKELIKNGIGEGQIGIITPYNSQANLIRHAACMTSLEIHTIDKYQGRDKECILVSFVRSCENPSSYASSLLGDWHRINVALTRGKKKLIMVGSCKTLSKVPLLKLLIKKVEEQSGILSVSKKDIYQKGELKRCSQIR 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0741 1431 Pfam Domain of unknown function DUF83 661 770 IPR022765 -
Dere11g0741 1431 PANTHER DNA2/NAM7 HELICASE FAMILY 335 1408 IPR045055 -
Dere11g0741 1431 CDD DEXXQc_DNA2 1012 1211 IPR026851 GO:0017116
Dere11g0741 1431 Pfam DNA replication factor Dna2 451 652 IPR014808 -
Dere11g0741 1431 FunFam DNA replication helicase 1210 1423 - -
Dere11g0741 1431 CDD DNA2_N-like 506 741 - -
Dere11g0741 1431 CDD SF1_C_Upf1 1216 1405 IPR047187 -
Dere11g0741 1431 Gene3D - 506 770 IPR011604 -
Dere11g0741 1431 Gene3D - 940 1107 IPR027417 -
Dere11g0741 1431 Gene3D - 1108 1209 IPR027417 -
Dere11g0741 1431 Gene3D - 1210 1418 IPR027417 -
Dere11g0741 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1011 1396 IPR027417 -
Dere11g0741 1431 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 1108 1209 - -
Dere11g0741 1431 FunFam DNA replication helicase Dna2 617 770 - -
Dere11g0741 1431 MobiDBLite consensus disorder prediction 104 120 - -
Dere11g0741 1431 MobiDBLite consensus disorder prediction 104 130 - -
Dere11g0741 1431 Pfam AAA domain 1189 1388 IPR041679 -
Dere11g0741 1431 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 954 1103 - -
Dere11g0741 1431 Pfam AAA domain 1113 1179 IPR041677 GO:0004386
Dere11g0741 1431 Pfam AAA domain 1012 1103 IPR041677 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0741 Dere-ChrDere11 13171077 13195935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0741 82 1153 Core DNA Replication Machinery Family AT1G08840 54.118 0.0 1082