Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0723 ATGTCCTTCAATCAATCAAGGTCCGACAAAAGCGACACTCAGTACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCACCGAGGTTCCTCAGGCACGTACGTTAGGGGCGGTGGCGGCGGGCCCGCGCCTTCACCCTCGATCACGTCGGGTTCCTCACAGCCCTCTAATCGGAGTTTTAAGAGGTCTAATAATGCACATGGTGGGCAATCTGGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCCGGACGATACCAAATGGTGGCCATTTACAACAATTGCCTGGAGGATCTGATGCACCCGTTACAAATGCAACTGCCAAGTCAACTGAATCCTCATCTGCACAGAAGAGTGCTGGAGTTGTTCCGAAAGCACCAACTCCTCGACCGCCCCCCGTGAATTCTGATCCTGCAGCTCCTACAACCCCTGCCAAGGCCCCTGCAGATTCATCCAAGCCATTTGCTTTCCAATTTGGGTCCATTAGTCCTGGTTTTATGAATGGGATTTCCATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTGGACGAGCAGAAAAGAGATCAGGCTCGTCATGATTCTTTTAGGTCTGTGCCTTCAGTGCCAATACCTCCAAAACAACTACCACCAAGGAAGGATGCAGGTGTTGCAGACCAATCTAATGCTGGGGAGAGTCATCCAGTGACCAAGGCCAAAAAAGATGCTCAGTTCTTAACTTTGCCTCCATCAAGCCAGGTGCAGAAGCCTTCTGTTCCCTTGACTGGGATCTCAATGGCAATGCCATATCACCACCAGTCACAAGCATCTGTACAGTTTGGTGGTCCTAACGCACAGATTCAATCTCAGGGCATGCCTGCATCATCTCTTCAGATGCCTCCTATGCCAATGCCTTTACCAATTGGAAATGCTGCACAAGTACAACAGCAGGTTTTTGTTCCAGGTCTTCAACCTCTTCCTATTCATCCTCAGGGAATCATGCATCAAGGCCAAAGCATGAGTTTCACTCCTCCAATGGGTCCTCAATTACCCCATCAGTTAGGTAGCATGGGTATAAACATCAACTCACAATATACCCAGCAGCAAGGAGGAAAATATGCTGGTCCTCGTAAAACTACTCCTGTCAAGATAACGCATCCAGATACACATGAAGAGCTGAGGCTTGACTTTGACAAGAAGGCAGATTCATATTCAGATGGCATGTCATCAGGTGCTAGGTCTTATCCTAATTTGCCTTCTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCTCATCCCATTAACTATTATCCATCTAGCACTTATAGCGGCAGCTCTAATTTATATGGCCCCCCTAGTTCTGTTCCTTTATCAAGCAGCCATATAACTCTTAGTTCTCAGCAGTCAAGATTTAATTATCCAGTGAACCATGCCCCCCAAAATGCAGGTTTCAACAATCAATTATCTCTTGGTTCCCTGCCTGTTAATAAGACTGGCACTTCTGTTCTGGGTGTTGTGGAAGCACCTAATCTGGAACATTCCGGTGATATGCATAAAGTGATGTCATCAGCTCCATCTGGCTTATGTTCTGCGAATATCAAGCCAAATGGTGGCTCTGGTATTGTGGACTCATCACTCTCCAGTTCCAGTATATCTGGTGTTAAAATGAGTGAACCTCCTAGTTCTTTAGGGACATCTGGTGATGCTAGCTCCCCCGTGTCTCAAAAAGGGTCTGATTCTGAAAGTTGTTCTGAAACCTCTTTGCAACATTCTAAGTCATCCAGAGATTCTTCAGTTTCAAGGTCTTTCCCCAAACAACCTGCTGCAGAATCTGCTGAGAAGCTTACAACTATTCCCTCGTTGTCTTCTTCAGCTGCTGTGAATGAGAAGTCTGTCTCAGTTGTGTCCAACACTGAAGGCAGGAGGAAGGAATCTCTTAGTATGTCAAACTCTTTGAAAGAAAATCAGAAGAAAACAGGGAAGAGGGGCCAATCACAGCTTCAGGTTCCTGTAGAATCTCCTACAGTGGCTGATGTACCTACTCAAGCTGTTGATGGTGTTATGCCTGATCGTGAAGTTTCTGAAACTATAGAAAACAGAACAAACCATTCTGAAGTAATTGCCAGTGAAGATATCTCTGCCACACCAGACACACAATCAGCTACTGCTAGTGGTGGTAGCATTCCTAATGCTGTTGAAATGAAGGCAGACGGTTCTGCAGAAGGTTATGTTTGTGTTTCAGCTGATGGAGCTGGTGCTCTACCTGTTGGTCGTTTGAACAATCATGAGCATGATAAGCTAGAGGAACTTTCACAACAGGATAAACTATTGAAGATGAATATTCAGGAAATGGGTGATAAAAATGAAAGATCTTCTGAAGTATCTAAGCAAAATATTAATGACAATGGAACTAAATTTAAACAAACAGATCAAGATGCAGCAAAGGAATCCACTGACCTTCAATTTGCGAAGACTGTACAGCAAAGACCTGAATTGCAGGATGAATCGTCGAATTTTAGATCAGAATATGATAGGGAGGGTGATAATTTAGACATATCCTTGTCCGCTGATTTGGATTCTAGAGATATCTCTTTAGATAGTAATGATAGTATAGTTAGTAATGAATCTACTTCTGTAAATTCTGCTGTATCTGATATGAATTGTGGTGATCCTCCGGAAGCAATTTCAAAACATAGCAAGGATGGTGCAGAGAATACTGACACTGGCTTAGTGTCCCTTCCAATGTCAGGTAAAAAGGATAGACCTATTTCAGAACCAAATAAGGTAAAACCTACATCCAAAGGGAAGACGAAAAGAAGGGATATTCTTCGGAAGGCCGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTACAGAGAGCACAGAAAGTACTTCTGGAAATTTGAAGCAATTACCTAAAGATGCAGCTCAACCAGATGCTATGGCAAGTGAGAAAAATGCACATAATAAAGTTGAGCCTGATGACTGGGAGGATGCTGCTGACTTGTCTACCCCAAAATTGGAAGTTGCATATAGAACTCAACAGGATTGTGATGGATGTGGACTTACAGCCAAAAAATACTCTAGAGATTTCCTTTTGAAATTCGCAGAGCAATGCATTGATCTTCCTGAAGGTTTTGAAATTACAGCAGACATTGGTGATGCCTTGATGAATGCTAATATTAGCAGCTTTCATGTTGAACGTGATTCACATCTTAGTTCAGGAAGAATTATAGATAGGTCTGGTAGCATGTCTCGAATGGACCGCCGTGGGGGTGGGCAGTTTGAGGAAGACCGGTGGGGTAAAGTCCCTGTACCTTTTCCAGGACGTGACTTGCGTATGGATGGCTTTGGAGGTAATGCAGGATTTAGACCTGGTCAAGGAGGCAATTATGGTGTTTTAAGGAACCCACGGGCACAGACACCTCTGCAATATGCTGGGGGCATCCTTTCTGGACCAATGCAATCCATGGGAAATCAGGGAGCTATGCAAAGAAATGGCCCAGATGGTGAGAGGTGGCAGCGTTCTACTACCTACCAGCAGAGGGGTTTATTTCCTTCTCCTCAAACCCCATTACAGATGATGCACAAAGCTGAGAAGAAATATGAGGTGGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGGCAGTTGAAAGCTATCCTAAACAAGCTTACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGTCACTCTCACTGGTGTGATCTCGCAGATATTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCAAATTTCTGCTTCCATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTATTAAATAAGTGCCAGGAGGAGTTTGAGAGGGGTGAAAGGGAGCAAGAAGAAGCTAATAAGGCGGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGAAAAAAGAATTAAGGCAAGAAGACGAATGTTGGGTAACATCAGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGAATAATGCATGAGTGCATCAAGACGTTACTGGGTCAGTATCATCAGGACCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATACCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGATTTATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACCAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCGCAAACTGGTAGGCTAGGTCGTGGTCCAGGCAACAGTCCATCAGCAAGAAGGATGCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAACACTCATATGGGACTGCGTGGGCAACCTGCTCAAGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAGGATGATCGGTTATCATATGAGGCTAGAAATTTGTCAGTTCCCTTGCCTCAAAGGCCTTTAGGTGATGATTCTATTCCCTTGGGTCCCCAAGGTGGTCTTGCACGAGGAATGTCCTTTAGAGGGCCAGGTGCTCCTGTTTCTGATGTACTTCCAGTCCCTGCCGACTCTCAAAGAATGACTGCTGGTGCTAATGGTTACAGCAATTCATCAGAGCGTGCATTGTACAGCTCTAGAGAGGATCTAATGCCTAGATCTGGGACAGATAGATTTGCCAGTCCAACTGCTTATGACCAATCAGGTGTTCAAGAACGTAATATGAATTATGGTAACAGGGAATTGAGAAATGCAGACCGAGGTCATGAGAGACCTGTTACAATTTTGCCTCCTGCTGGAGCGCAAGGGCCAGCAGTCTCCCAGAATGCTTCTTTGGAGAAGGTATGGCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTATAGTGCTAGAGATGAGAAAGAAGTTGCTTTATGTATCAAAGATCTAAACTCTCCAAGCTTTCATCCCTCGATGATTTCTCTATGGGTCACTGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTAGTAGTCAACCTTGCAAAATCTCAGGATGGCACCTTGAGTCAGTTTCAGCTTATCCAAGGGTTTGAATCTGTTCTAAGCACTTTGGAGGATGCTGTTAATGATGCCCCTAGAGCAGCAGAATTTCTTGGCCGTATTTTTGCGAGGGTTGTAACAGAAAATGTTGTCTCTTTGAAAGAGATTGGCCAACTATTACGTGAAGGTGGAGAGGAGCCGGGCCGGCTTTTAGAAATTGGACTTGCAGCTGATGTTCTGGGAAGCACCTTGGAGGCAATAAAGTTGGAGAAGGGGGACGCTATTCTGAGTGAGATACGCCGAAGCTCAAACTTACAGCTGGAGACTTTCCGGCCACCTGATCCCATTACTTCCAGAAAGTTAGAAAAGTTTATTTAG 5619 0.4428 MSFNQSRSDKSDTQYRKSGRSGSFNQHRGSSGTYVRGGGGGPAPSPSITSGSSQPSNRSFKRSNNAHGGQSGVNPPPVNSAESNSASTGRTIPNGGHLQQLPGGSDAPVTNATAKSTESSSAQKSAGVVPKAPTPRPPPVNSDPAAPTTPAKAPADSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQARHDSFRSVPSVPIPPKQLPPRKDAGVADQSNAGESHPVTKAKKDAQFLTLPPSSQVQKPSVPLTGISMAMPYHHQSQASVQFGGPNAQIQSQGMPASSLQMPPMPMPLPIGNAAQVQQQVFVPGLQPLPIHPQGIMHQGQSMSFTPPMGPQLPHQLGSMGININSQYTQQQGGKYAGPRKTTPVKITHPDTHEELRLDFDKKADSYSDGMSSGARSYPNLPSQSQPVQSFAASHPINYYPSSTYSGSSNLYGPPSSVPLSSSHITLSSQQSRFNYPVNHAPQNAGFNNQLSLGSLPVNKTGTSVLGVVEAPNLEHSGDMHKVMSSAPSGLCSANIKPNGGSGIVDSSLSSSSISGVKMSEPPSSLGTSGDASSPVSQKGSDSESCSETSLQHSKSSRDSSVSRSFPKQPAAESAEKLTTIPSLSSSAAVNEKSVSVVSNTEGRRKESLSMSNSLKENQKKTGKRGQSQLQVPVESPTVADVPTQAVDGVMPDREVSETIENRTNHSEVIASEDISATPDTQSATASGGSIPNAVEMKADGSAEGYVCVSADGAGALPVGRLNNHEHDKLEELSQQDKLLKMNIQEMGDKNERSSEVSKQNINDNGTKFKQTDQDAAKESTDLQFAKTVQQRPELQDESSNFRSEYDREGDNLDISLSADLDSRDISLDSNDSIVSNESTSVNSAVSDMNCGDPPEAISKHSKDGAENTDTGLVSLPMSGKKDRPISEPNKVKPTSKGKTKRRDILRKADAAGSTSDLYNAYKGPEEKKEAVVSTESTESTSGNLKQLPKDAAQPDAMASEKNAHNKVEPDDWEDAADLSTPKLEVAYRTQQDCDGCGLTAKKYSRDFLLKFAEQCIDLPEGFEITADIGDALMNANISSFHVERDSHLSSGRIIDRSGSMSRMDRRGGGQFEEDRWGKVPVPFPGRDLRMDGFGGNAGFRPGQGGNYGVLRNPRAQTPLQYAGGILSGPMQSMGNQGAMQRNGPDGERWQRSTTYQQRGLFPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKTLLGQYHQDPDEEDIEALCKLMSTIGEMIDHTKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQPKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNSPSARRMPMDFGPRGSSMLSSPNTHMGLRGQPAQVRSGGSQDVRQDDRLSYEARNLSVPLPQRPLGDDSIPLGPQGGLARGMSFRGPGAPVSDVLPVPADSQRMTAGANGYSNSSERALYSSREDLMPRSGTDRFASPTAYDQSGVQERNMNYGNRELRNADRGHERPVTILPPAGAQGPAVSQNASLEKVWPEERLRDMSMAAIKEYYSARDEKEVALCIKDLNSPSFHPSMISLWVTDSFERKDTERDLLAKLVVNLAKSQDGTLSQFQLIQGFESVLSTLEDAVNDAPRAAEFLGRIFARVVTENVVSLKEIGQLLREGGEEPGRLLEIGLAADVLGSTLEAIKLEKGDAILSEIRRSSNLQLETFRPPDPITSRKLEKFI 1872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1452 1475 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 612 653 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 45 95 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 539 676 - -
Dere11g0723 1872 SMART if4_15 1228 1451 IPR003890 GO:0003723|GO:0005515
Dere11g0723 1872 MobiDBLite consensus disorder prediction 401 423 - -
Dere11g0723 1872 FunFam Eukaryotic translation initiation factor 4G 1678 1871 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1452 1533 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1095 1120 - -
Dere11g0723 1872 ProSiteProfiles MI domain profile. 1684 1808 IPR003891 -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 783 846 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 176 190 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1504 1528 - -
Dere11g0723 1872 Gene3D - 1228 1464 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1095 1110 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 863 1010 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 131 145 - -
Dere11g0723 1872 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 352 1872 IPR045208 GO:0003743
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1319 1344 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 539 604 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 864 884 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 104 127 - -
Dere11g0723 1872 SUPERFAMILY ARM repeat 1680 1869 IPR016024 -
Dere11g0723 1872 SUPERFAMILY ARM repeat 1222 1454 IPR016024 -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 707 731 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 814 833 - -
Dere11g0723 1872 Pfam MIF4G domain 1228 1451 IPR003890 GO:0003723|GO:0005515
Dere11g0723 1872 MobiDBLite consensus disorder prediction 707 726 - -
Dere11g0723 1872 FunFam Eukaryotic translation initiation factor 4G 1228 1464 - -
Dere11g0723 1872 Gene3D - 1678 1872 - -
Dere11g0723 1872 SMART ma3_7 1685 1799 IPR003891 -
Dere11g0723 1872 Coils Coil 1310 1330 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 406 423 - -
Dere11g0723 1872 Pfam MA3 domain 1689 1797 IPR003891 -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 17 32 - -
Dere11g0723 1872 MobiDBLite consensus disorder prediction 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0723 Dere-ChrDere11 12714986 12723296 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0723 1 736 Eukaryotic Initiation Factors Gene Family AT3G60240 35.806 1.96e-82 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0723 11 12714986 12723296 Dere11g0723 11 12714986 12723296 ECH