Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0721 ATGTCCTTCAATCAATCAAGGTCCGACAAGAGTGACACTCACTACCGTAAATCCGGGCGATCAGGGGGCTTCAATCAGCAGCGAGGTTCCTCTGGCACTTACGGTAAGGGCGGTGTTGGCGGGCCCGCGCCTTCACCCTCGATCATATCGGGTTCTTCACAGCTCTCTAATCGGAGTTTTAAAAGGCCTAATAATGCACATGGTGGGCAATCTAGGGTAAACCACCCCCCTGTGAATTCAACCGAGTCTAGTAGTGCTTCTACAGGCCGGACGATACCAAATGGTGGCCGTTTACAACAATTGCCTGGGGCATCTATTGCACCCGTTACGAATGCAACTGCCAAGTCAACTGAATCCTCATCTGCACAGAAGAGCGCTGGAGTTGTTCCAAAAGCTCCAACTCCTCAACTTCCCCCCGTGAATTCTGATCCAGCAGATACTGCAACCCCTGCCAAAGCCCCTGGAGATTCATCCAAGCCATTTGCTTTCCAATTTGGGTCCATTAGTCCCAGTTTTATGAATGGGATTTCAATTCCTGCTCGTACGAGCTCAGCTCCTCCTAATTTGGACGAGCAGAAAAGAGATCAGGCTTGTCATGATTCTTTTAGGCATGTGCCTTCAGTGCCAATGCCTCCAAAACAGCTACTACCAAGGAAGGATGCAGGTGCTGCTGACCAATCTAATGCTGGGGAGGCATATCCGGTGAACAAGGCCAAAAAGGATGCTCAGTTATTAGCTTTGCCCCCATCAAGCCAGGTGCAGAAGCCTTCTGTTCCCTTGACTGGGATTTCAATGGCAATGCCATATCACCACCAGTCTCAAGCATCTGTACAGTATGGTGGTCCTAACCCTCAGATTCAATCTCAGGGCATGCCTGCAGCATCTCTTCAGATGCCTATACCGATGCCTTTACCAATTGGAAATGCTGCACAAGTACAACAGCAGGTTTTTGTTCCAGGTCTTCAACCTCTTCCTATTCATCCTCAGGGAATCATGCATCAAGGCCAAAACATGAGTTTCACTCCTCAAATGGGTCCTCAATTACCCCATCAGTTAGGTAACATGGGTATTAACATCAACCCACAATATCCCCAGCAGCAAGGAGGAAAACTTGCTGGACCTCGTAAAACTACTCCTGTCAAGATAACTCATCCAGATACACATGAGGAGCTGAGGCTTGACTTTGACAAAAAGGCAGATTCATATTCAGATGTCATGTCATCAGGTGCTAGGTCTTATCCTAATGTGCCTTCTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCTCATCCCATTAACTATTATCCATCTAGCAGTTATAGTAGCGGCTCTCCTTTTTTCCCTCCTAGTTCTATTCCATTATCAAGCGGCCATATAACTCCTAGTTCTCATCAAACAAGATTTAATTACCCAGCAAACCATGGCCCCCAAAATGCAGGTTTCAACAATCAATTATCCCTTGGTTCCCTGCCTGTTAATATGACTGGCACTTCTATTCCTGTTATTGTGGAAACACCTAATCTGGAGCATTCCCATGACGTGCATAAAGTGATGTCATCAGCTACATCTGGATTAACTTCTGCGAATAGCAAGCGAATTGGTGGCTCTTTTATTATGGACTCGTCACTCTCCAATTCCAGTATATCTGGTGTTAAAATGAGTGAATCTCTTAGTTCTTTAGGTACATCTGGTGATGCTAGCTCCTCTGTGTCTCATAAAGGGTCTGAAACTTGTTCTGAAACCTCTTCGCAGCATTCTAAGTCATCCGGAGATTCTTCAGTTTCAAAGTCTTTGCCCAAACAACCTGTTGCAGGATCTGCTGAGAAGCTTACAACTACTCCCCTGATGCCTTCTTCAGCTGCTGTGAATGAGAATTCTGTCTCAGTTGTGTCCAACAATAAAGGCAGGAGGAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAAGAAAATCAGAAGAAAACAGGGAAGAGGGGTCAATCACTGCATCAGGTTCCTGTACAATCTCCTACAGTGGCTGACGTACCTAATGAAGCTGTTGATAGTGTTATGCTTGATCATGAAGTTTCTGAAACACCAGAAAATAAAAGCAACCTTTGTGCAGCAATTACCAGTGAAGATATCCCTGCCACACCAGACACCCTTTCAGCTACAGCTAGTGGTGGTAGCATTTCTAATGGCGTTGAAATGAAGACTGACGTTTTCGCAGAAGGTTCTGTTTGCATTTCAGCTGAAGGAGCTGGTGCTCTAGCTGTTAGTAGTATGAACAATCACGAGCATGATAAGCTAGAGGAAGTTTCCCAACAGGATAAACTATTAAATATGAATATTCTGGAAATGGGTGATATAAATGAAAGATCTTCTGAAGTATTGAAACAAAATATTAGTGACGATCAAACTAAAGTTAAACAAACAGATCAAGATGCAGCAAAGGAATCCTCTGAGCTTCAATTTGCAAAGACTGTACAGCAAAGGCCAGAATTGCAGGATGAATCTTCGAATTGTAGATCAGAATATGATAGGAAGGGTGATAATTTAGACATATCCTTGTCCGCTGATTTGGATTCTAGAGATATCTCTTTAGATAGTAATGATAGTATAGTTAGTAATGAATCTACTTCTGTAAATTCTGCTGTATCTGATATGAATTGTGGTGATCCTCCAGAAGCAACTTCAAAACATAGCAAGGATGGTGCAGAGAATACTGACACTGGCTTAGTGTCCCTTCCAATGTCAGGTAAAAAGGATAGACCTATTTCAGAACCAAATAAGGTAAAACCTACATCCAAAGGGAAGAAGAAAATAAGGGAGATTCTTCGGAAGGCCGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACATGGGACCTGAGGAAAAGAAAGAAGCTGTTGTAAGTACAGAGAGCACAGAAAGTACTTCTGGAAGTTTGAAGCAATTACCTGAAGATGTGGCTCAACCAGATGCTGTGACAAGTGAGAAAAATGCACATAATAAAGTTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTACCCCAAAATTGGAAGTTGCAGATAGAACTCAACAGGATTGCGATGGAATTGGACTTACAGCCAAAAAATACTCTAGAGATTTCCTTTTGAAATTCGCAGAGCAATGCATTGATCTTCCTGAAGGTTTTGAAATTACGGCAGACATTGCTGATGCTTTAATGAATGCTAATATTACCAGCTCTCATGTTGAACGTGATTCACATCTTAGCTCAGGAAGAATTATAGATAGGTCTGGTAGCATGTCCCGAATGGACCGCCGTGGGAGTGGCCAGTTTGAGGAAGATCGGTGGAGTAAAGTCCCTGGAGGTAATGCAGGATTTCGACCTGGTCAAGGTGGCAATTTTGGTGTTTTAAGGAACCCTCGTGGAGGAATCCTTTCTGGACCAATGCAATCCATGGGAAGTCAGGGAGCTATGCAAAGAATTAGCCCTGGTGGTGAGAGGTGGCAACGTTCTGCTGCCTACCAGCTGAGGGGTTTAATTCCTTCTCCTCAAACCTCATTACAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGGAAGGTGACAGATGAGGAACAGGCAAAGCAGAGGCAGTTGAAAGCCATCTTAAACAAGCTTACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGTCACTCTCACGGGTGTGATCTCACAGATATTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCAAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTATTAAATAAGTGCCAGGAGGAGTTTGAGAGGGATGAAAGGGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAAAGGGAAGAAAAAAGAATTAAGGCAAGAAGACGCATGTTGGGTAACATCAGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGAATAATGCACGATTGCATCAAGAAGTTACTGGGTCAGTATCATCAGGACCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATACCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGAGTGAGATTTATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACTAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCGCAAACTGGTAGGCTAGGTCGTGGTCCAGGCAACAGTCCATCAGCAAGAAGGATGCCTATGGATTTTGGTCCTAGAGGGTCATCTATGTTGTCTTCTCCTAATACTCATATGGGACTGCGTGGGCAACCTGCTCAAGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAGGATAATTGGCTATCATACGAGGCTAGAAATTTGTCAGTTCCCTTGCCTCAAAGGCCTTTAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGGTGTAATTCCAAGTTCTCCTGTTCCTGATGTACTTCCATTCCCTGCTGACTCTCGAAAAATGACTGCTGGTGCTAATGGTTATACCAATTCATCAGAGCATGCACTGTACAGCACTAGGGAGGATCCCATGCCTAGATCTGTTACAGATAGATTTGCTGTTCCAACTGCTTATGACCAATCAGGTGCTCAAGAGTGTCATATGAATTATGGTAACAGAGAGTTGAGAAACACAGACCGGGGTCTTGTGACGCCTGTTACAATTTTACCTCCCACTGGGGTGCAAGGACCAGCAGTATCCCAGAATGCTTCTGTGGAAAAGGTATGGCCAGAAGAACGACTGCAGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGAGAAAGAAGTTGCTTTATGTATCAAAGATCTGAACTCTCCAAGCTTTCATGCGTCGATGATTTCTCTATGGGTCAGTGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTGGTAGTCAAGCTTGCGAAGTCTCAGGATGGCACCTTGAGTCAAGTTCAGCTTATTGAAGGGTTTGAATCTGTTCTAAGTACTTTGGAGGATGCTGTTAATGATGCCCCTAAAGCAGCAGAATTTCTTGGCCGTATTTTTGCAAGGGTTGTAACAGAAAATGTTGTCTCTTTGAAAGAGATTGGCCAACTATTACGTGAAGGTGGAGAGGAGCCGGGCCGGCTCTTGGAAATTGGACTTGCAGCTGATGTTCTGGGAAGCATCTTGGAGACAATAAAGATGGAGAAGGGGGATGATGTTCTGAGTGAGATACGCGCAAGCTCGAAATTATGGCTGGAGACTTTCCGGCCACCTGATCCCATTACATCAAGAAAGTTAGAAAATTTTATTTAG 5556 0.4361 MSFNQSRSDKSDTHYRKSGRSGGFNQQRGSSGTYGKGGVGGPAPSPSIISGSSQLSNRSFKRPNNAHGGQSRVNHPPVNSTESSSASTGRTIPNGGRLQQLPGASIAPVTNATAKSTESSSAQKSAGVVPKAPTPQLPPVNSDPADTATPAKAPGDSSKPFAFQFGSISPSFMNGISIPARTSSAPPNLDEQKRDQACHDSFRHVPSVPMPPKQLLPRKDAGAADQSNAGEAYPVNKAKKDAQLLALPPSSQVQKPSVPLTGISMAMPYHHQSQASVQYGGPNPQIQSQGMPAASLQMPIPMPLPIGNAAQVQQQVFVPGLQPLPIHPQGIMHQGQNMSFTPQMGPQLPHQLGNMGININPQYPQQQGGKLAGPRKTTPVKITHPDTHEELRLDFDKKADSYSDVMSSGARSYPNVPSQSQPVQSFAASHPINYYPSSSYSSGSPFFPPSSIPLSSGHITPSSHQTRFNYPANHGPQNAGFNNQLSLGSLPVNMTGTSIPVIVETPNLEHSHDVHKVMSSATSGLTSANSKRIGGSFIMDSSLSNSSISGVKMSESLSSLGTSGDASSSVSHKGSETCSETSSQHSKSSGDSSVSKSLPKQPVAGSAEKLTTTPLMPSSAAVNENSVSVVSNNKGRRKESLSRSNSLKENQKKTGKRGQSLHQVPVQSPTVADVPNEAVDSVMLDHEVSETPENKSNLCAAITSEDIPATPDTLSATASGGSISNGVEMKTDVFAEGSVCISAEGAGALAVSSMNNHEHDKLEEVSQQDKLLNMNILEMGDINERSSEVLKQNISDDQTKVKQTDQDAAKESSELQFAKTVQQRPELQDESSNCRSEYDRKGDNLDISLSADLDSRDISLDSNDSIVSNESTSVNSAVSDMNCGDPPEATSKHSKDGAENTDTGLVSLPMSGKKDRPISEPNKVKPTSKGKKKIREILRKADAAGSTSDLYNAYMGPEEKKEAVVSTESTESTSGSLKQLPEDVAQPDAVTSEKNAHNKVEPDDWEDAADMSTPKLEVADRTQQDCDGIGLTAKKYSRDFLLKFAEQCIDLPEGFEITADIADALMNANITSSHVERDSHLSSGRIIDRSGSMSRMDRRGSGQFEEDRWSKVPGGNAGFRPGQGGNFGVLRNPRGGILSGPMQSMGSQGAMQRISPGGERWQRSAAYQLRGLIPSPQTSLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERDEREQEEANKADEGEVKQSDEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHDCIKKLLGQYHQDPDEEDIEALCKLMSTIGEMIDHTKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQLKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNSPSARRMPMDFGPRGSSMLSSPNTHMGLRGQPAQVRSGGSQDVRQDNWLSYEARNLSVPLPQRPLGDDSITLGPQGGLARGMSFRGPGVIPSSPVPDVLPFPADSRKMTAGANGYTNSSEHALYSTREDPMPRSVTDRFAVPTAYDQSGAQECHMNYGNRELRNTDRGLVTPVTILPPTGVQGPAVSQNASVEKVWPEERLQDMSMAAIKEYYSARDEKEVALCIKDLNSPSFHASMISLWVSDSFERKDTERDLLAKLVVKLAKSQDGTLSQVQLIEGFESVLSTLEDAVNDAPKAAEFLGRIFARVVTENVVSLKEIGQLLREGGEEPGRLLEIGLAADVLGSILETIKMEKGDDVLSEIRASSKLWLETFRPPDPITSRKLENFI 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0721 1851 MobiDBLite consensus disorder prediction 860 880 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1092 1126 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 46 95 - -
Dere11g0721 1851 ProSiteProfiles MI domain profile. 1663 1787 IPR003891 -
Dere11g0721 1851 FunFam Eukaryotic translation initiation factor 4G 1657 1850 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1092 1106 - -
Dere11g0721 1851 Coils Coil 1285 1305 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 961 1007 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 810 829 - -
Dere11g0721 1851 SMART if4_15 1203 1426 IPR003890 GO:0003723|GO:0005515
Dere11g0721 1851 MobiDBLite consensus disorder prediction 794 841 - -
Dere11g0721 1851 Gene3D - 1203 1439 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1294 1321 - -
Dere11g0721 1851 SUPERFAMILY ARM repeat 1197 1428 IPR016024 -
Dere11g0721 1851 FunFam Eukaryotic translation initiation factor 4G 1203 1439 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 18 33 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1479 1504 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 104 127 - -
Dere11g0721 1851 SMART ma3_7 1664 1778 IPR003891 -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1438 1504 - -
Dere11g0721 1851 SUPERFAMILY ARM repeat 1659 1847 IPR016024 -
Dere11g0721 1851 Pfam MIF4G domain 1203 1426 IPR003890 GO:0003723|GO:0005515
Dere11g0721 1851 MobiDBLite consensus disorder prediction 556 674 - -
Dere11g0721 1851 Pfam MA3 domain 1670 1776 IPR003891 -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 636 656 - -
Dere11g0721 1851 Gene3D - 1657 1851 - -
Dere11g0721 1851 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 351 1851 IPR045208 GO:0003743
Dere11g0721 1851 MobiDBLite consensus disorder prediction 556 635 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 162 190 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 859 932 - -
Dere11g0721 1851 MobiDBLite consensus disorder prediction 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0721 Dere-ChrDere11 12661122 12669329 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0721 1 674 Eukaryotic Initiation Factors Gene Family AT3G60240 37.429 2.43e-87 315