Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0719 ATGCTGTGGGTTGGCTCTTCCCCAAACGACACCGTTGCGAAAAGGTTTCACTCGAACGGCTCTTCGGCTCATTCTTTGGTTTCTCCCAATCTTTCTCATCTTCCTCCGAAGCCAACCAAAATGACCAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATATGGCACCCGATATGGTGCCAGTCTTAGAAAGCAAATTAAGAAGATGGAAGTGAGTCAGCACAGCAAATACTTCTGTGAATTCTGTGGAAAGTATGCTGTTAAGAGAAAGGCTGTGGGTATATGGAGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACATTGAATACTGCAAGTGCGGTGACAGTCCGTAGCACCATAAGGAGGTTGAGAGAGCAGACTGAGAGTTGA 399 0.4637 MLWVGSSPNDTVAKRFHSNGSSAHSLVSPNLSHLPPKPTKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWSCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0719 132 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 44 112 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dere11g0719 132 NCBIfam ribosomal protein eL43 41 131 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dere11g0719 132 MobiDBLite consensus disorder prediction 19 46 - -
Dere11g0719 132 PANTHER ZGC:171772 33 131 - -
Dere11g0719 132 SUPERFAMILY Zn-binding ribosomal proteins 50 122 IPR011332 GO:0006412
Dere11g0719 132 Gene3D - 41 132 IPR011331 GO:0003735|GO:0005840|GO:0006412
Dere11g0719 132 FunFam 60S ribosomal protein L37a 42 132 - -
Dere11g0719 132 Pfam Ribosomal L37ae protein family 44 128 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0719 Dere-ChrDere11 12644125 12646752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0719 41 132 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.478 5.86e-60 178