Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0688 ATGGCTTCACCTTCTTCGCCGATTGATTCTACCCCGACTCCGGATCCTCCCTCGGCCGTGCCCCTTCCCCTCCCGGCGCCACCATCCTCTCGTCGCCTTCCGCCACCGTGCTGGTCCCACGACGAGACCGTCGCCCTCATCGACGCGTACCGCGATAAGTGGTATTCGCTAGGCCGTGGCAATCTGAAGGCTACTCACTGGCAAGAGGTCGCCGATGCCGTCACCAGCCGTTGTCCGAATGCGTCTCCGCCCAAAACTGCCGTCCAGTGTCGCCACAAGATGGAGAAGCTCCGCAAGCGATACCGTACAGAGATCCAGCGTGCCCGGTCTCTCCCCGTTGCCCGATTCAATTCGTCTTGGGTCCATTTCAAGCGCATGGATTCCATGGAGAAAGGCCCTTCCACGGTCAAACCTGAGAACAATTCCGATAGCCCTGATGAGATGGACCACGATGAGGACGACGATGATCAAGATTTATACGAGGAATTTAAGAACGACGGGGGGTCTAACACGAGGAGCTTGAATAAATTGTATCGGAACGGAATCGTAGGTGGTACTGACGGCGTCGGTGGAGGCGGGTTTCGGATTCGGATTCCGACTGGGGTGAGTATAGCGCAACCTGGGACAAAGTTTTATGGCAAGCTCGCTGATCAGAAATTTAACCCCAATTCGAACTCTGCCGCACCTAGCTCCAATTGCAGCCCCAATTATGGTACTAGGGTTTTGAAAGAGAAGAGTGGATTGGGGAAGAGGGAGAGAGAGAGGGACCCAGTGGGAGAGATGGTGACTGCAATTAAGGTTTTAGGGGATGGGTTCGTGAGGATGGAACAGATGAAGATGGAGATGGCAAGGGAGATTGAAACCATGAGGATGGAGATGGAAATGAAGCGTACTGAGATGATTTTGGAGTCCCAACAACGAATTGTGGAGGCATTCGCGAAGGCAGTTTCGGAGAAGAAGAAGAAGGCAAAGAGAATGCCGTCACCTCCAGAATTGTAG 999 0.5385 MASPSSPIDSTPTPDPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKATHWQEVADAVTSRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKRMDSMEKGPSTVKPENNSDSPDEMDHDEDDDDQDLYEEFKNDGGSNTRSLNKLYRNGIVGGTDGVGGGGFRIRIPTGVSIAQPGTKFYGKLADQKFNPNSNSAAPSSNCSPNYGTRVLKEKSGLGKRERERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKKAKRMPSPPEL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0688 332 Coils Coil 91 111 - -
Dere11g0688 332 MobiDBLite consensus disorder prediction 9 34 - -
Dere11g0688 332 FunFam Trihelix transcription factor ASIL2 38 103 - -
Dere11g0688 332 Gene3D - 38 103 - -
Dere11g0688 332 SMART 118neu2 45 134 IPR006578 -
Dere11g0688 332 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Dere11g0688 332 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 318 IPR044823 -
Dere11g0688 332 MobiDBLite consensus disorder prediction 1 35 - -
Dere11g0688 332 MobiDBLite consensus disorder prediction 145 161 - -
Dere11g0688 332 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0688 Dere-ChrDere11 11859427 11860425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0688 37 129 Trihelix Transcription Factor Family AT3G14180 38.710 1.02e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere11g0688 Myb_DNA-bind_4 2.6e-21 CL0123